Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORA74.3-201ENST00000517108 154 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 MIR4299-201ENST00000577899 72 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 AL513423.1-201ENST00000621695 132 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.37□□□□□ -2.03
ATG3Q9NT62 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG3Q9NT62 SNORD114-10-201ENST00000363409 72 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 RNU6-112P-201ENST00000363599 104 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 RNU6-321P-201ENST00000410912 106 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 AP1B1P2-201ENST00000416196 106 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 AC087499.7-201ENST00000441958 109 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 MIR4303-201ENST00000581299 66 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 uc_338.20-201ENST00000621563 178 ntBASIC2.36□□□□□ -2.03
ATG3Q9NT62 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG3Q9NT62 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.35□□□□□ -2.03
ATG3Q9NT62 RNU6-1237P-201ENST00000384777 107 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 RNA5SP212-201ENST00000391223 107 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 AC244636.1-201ENST00000421152 228 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 RNU7-48P-201ENST00000458875 63 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 MIR548AO-201ENST00000579992 96 ntBASIC2.35□□□□□ -2.03
ATG3Q9NT62 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.35□□□□□ -2.03
ATG3Q9NT62 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
ATG3Q9NT62 RNU6-478P-201ENST00000363904 110 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 RNY1P13-201ENST00000365030 105 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ATG3Q9NT62 RNA5SP233-201ENST00000459153 113 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 MIR4709-201ENST00000577272 72 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 MIR4255-201ENST00000579351 72 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 AC145423.2-201ENST00000610631 239 ntBASIC2.34□□□□□ -2.03
ATG3Q9NT62 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
ATG3Q9NT62 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 MTND5P40-201ENST00000559945 246 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 AC008133.2-201ENST00000624540 351 ntBASIC2.33□□□□□ -2.04
ATG3Q9NT62 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG3Q9NT62 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
ATG3Q9NT62 Y_RNA.98-201ENST00000363109 102 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 RNA5SP133-201ENST00000363368 119 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 MIR1287-201ENST00000408492 90 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 RNA5SP445-201ENST00000515889 115 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 RNU6-917P-201ENST00000516294 104 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 MIR4764-201ENST00000580680 88 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 AL627230.6-201ENST00000611129 280 ntBASIC2.32□□□□□ -2.04
ATG3Q9NT62 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ATG3Q9NT62 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.32□□□□□ -2.04
ATG3Q9NT62 MIR424-201ENST00000362227 98 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 Y_RNA.354-201ENST00000365448 111 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 RNU6-1067P-201ENST00000384752 107 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 snoU13.27-201ENST00000459278 104 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 AC004223.1-201ENST00000479840 271 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 Y_RNA.788-201ENST00000622394 112 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 AP001362.1-201ENST00000625165 124 ntBASIC2.31□□□□□ -2.04
ATG3Q9NT62 RNU6-447P-201ENST00000410293 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-1118P-201ENST00000410382 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-1076P-201ENST00000410397 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-355P-201ENST00000410427 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-791P-201ENST00000410467 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-705P-201ENST00000410601 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-1100P-201ENST00000410691 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-860P-201ENST00000410860 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU4-83P-201ENST00000410863 133 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-1217P-201ENST00000411276 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-785P-201ENST00000411324 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 RNU6-523P-201ENST00000516304 54 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 SNORA25.13-201ENST00000516395 103 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 MIR3935-201ENST00000583472 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 U6.90-201ENST00000614007 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 U6.70-201ENST00000620287 104 ntBASIC2.3□□□□□ -2.04
ATG3Q9NT62 Y_RNA.57-201ENST00000362806 113 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 RNU6-480P-201ENST00000384332 107 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 RNU6-519P-201ENST00000410590 108 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 AL450471.1-201ENST00000447509 127 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 SNORD4B-201ENST00000459083 72 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 CYP3A52P-201ENST00000563326 91 ntBASIC2.29□□□□□ -2.04
ATG3Q9NT62 HSBP1P2-201ENST00000299671 229 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 SNORD115-37-201ENST00000363768 82 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 SNORD38.2-201ENST00000384470 69 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 RNU7-41P-201ENST00000515917 61 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 RNU7-43P-201ENST00000516554 64 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 AC141846.1-201ENST00000568348 142 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.28□□□□□ -2.04
ATG3Q9NT62 AL096840.1-201ENST00000603287 93 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 AC012493.3-201ENST00000604494 112 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 AL359821.1-201ENST00000605519 182 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.28□□□□□ -2.04
ATG3Q9NT62 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATG3Q9NT62 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
ATG3Q9NT62 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
ATG3Q9NT62 MIR520C-201ENST00000385005 87 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 RNU6-129P-201ENST00000391022 107 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 SNORA67.5-201ENST00000391036 107 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 RNU7-85P-201ENST00000458851 63 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms