Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 MIR876-201ENST00000401147 81 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 snoU13.11-201ENST00000459219 104 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 MIR378D2-201ENST00000580636 98 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 uc_338.28-201ENST00000612082 187 ntBASIC-0.45□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 RNA5SP205-201ENST00000364653 136 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 RNU6-806P-201ENST00000365147 105 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 SERF1AP1-201ENST00000514575 187 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 RNU6-561P-201ENST00000516222 102 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 RNU7-161P-201ENST00000517289 62 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 MIR6507-201ENST00000613630 70 ntBASIC-0.46□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 RNU4-84P-201ENST00000364200 139 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 SNORA25.7-201ENST00000364375 127 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 RNU6-480P-201ENST00000384332 107 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 AC244505.6-201ENST00000452829 130 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 AC082651.2-201ENST00000496833 166 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 NAMPTP3-201ENST00000569273 224 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 MIR4795-201ENST00000584182 89 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 AL365205.2-201ENST00000594586 68 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 AL627230.5-201ENST00000619807 58 ntBASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
TREX1Q9NSU2 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 RNU6-728P-201ENST00000365375 104 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 RNU6-30P-201ENST00000384561 107 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 AC073869.9-201ENST00000641610 120 ntBASIC-0.48□□□□□ -2.49
TREX1Q9NSU2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 SNORA32-201ENST00000384072 121 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 RNU7-113P-201ENST00000459273 62 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 RNA5SP33-201ENST00000516687 98 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 RNU7-35P-201ENST00000517174 62 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 MIR548H5-201ENST00000580314 60 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 AC084368.1-201ENST00000620935 65 ntBASIC-0.49□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 AC006210.1-201ENST00000424882 111 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.5□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 SNORD110-201ENST00000408189 75 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 AC113618.1-201ENST00000416747 285 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 MTND5P22-201ENST00000458380 195 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 MTND3P22-201ENST00000510932 243 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 MIR4436A-201ENST00000585278 85 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 AL356055.1-201ENST00000602528 446 ntBASIC-0.51□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 SNORD75.1-201ENST00000408373 60 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 SNORD116-25-201ENST00000516517 92 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 SCARNA15-202ENST00000516881 127 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 RNU6-570P-201ENST00000517051 105 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 AC105081.1-201ENST00000617727 106 ntBASIC-0.52□□□□□ -2.49
TREX1Q9NSU2 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNA5SP403-201ENST00000363598 108 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNY1P2-201ENST00000364820 117 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 U8.6-201ENST00000364939 135 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 SNORD41.1-201ENST00000391000 69 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNA5SP144-201ENST00000410846 116 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 SNORD67.1-201ENST00000516618 108 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNU6-988P-201ENST00000519081 107 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 AC006504.6-201ENST00000590142 199 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RNU7-10P-201ENST00000607194 63 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 RN7SL660P-201ENST00000614852 299 ntBASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.53□□□□□ -2.49
TREX1Q9NSU2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 RNY1P6-201ENST00000384193 109 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 SNORA3B-201ENST00000391305 131 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 RNU6-651P-201ENST00000411040 105 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 BX276092.1-201ENST00000427368 251 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 MTND5P20-201ENST00000448677 143 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 AL121914.1-201ENST00000450188 156 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms