Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 RNU4-17P-201ENST00000365598 141 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 RNU6-651P-201ENST00000411040 105 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 RNU7-74P-201ENST00000459104 62 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 RNU7-13P-201ENST00000516413 62 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 RNU6-875P-201ENST00000516488 106 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 MIR4473-201ENST00000583731 91 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 MIR2909-201ENST00000617113 69 ntBASIC-0.59□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 RNU1-141P-201ENST00000364623 158 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 MIR519A1-201ENST00000385257 85 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 MIR1270-201ENST00000459320 83 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 MTND5P40-201ENST00000559945 246 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.6□□□□□ -2.51
VCX3AQ9NNX9 MIR369-201ENST00000362155 70 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 RNA5SP98-201ENST00000363158 137 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 RNU6-480P-201ENST00000384332 107 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 AL442663.2-201ENST00000554385 511 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 MIR4500-201ENST00000579472 76 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 MIR4645-201ENST00000583158 77 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 AL365265.1-201ENST00000621045 234 ntBASIC-0.61□□□□□ -2.51
VCX3AQ9NNX9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU6-103P-201ENST00000363686 107 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 SNORD42.2-201ENST00000365570 69 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 MIR613-201ENST00000385248 95 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 AL121914.1-201ENST00000450188 156 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU7-195P-201ENST00000458793 62 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 U2.14-201ENST00000615943 113 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 uc_338.36-201ENST00000622331 158 ntBASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.62□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 MIR181B2-201ENST00000385004 89 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 AL603914.1-201ENST00000401964 204 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 MIR548I2-201ENST00000408348 149 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 AC113618.1-201ENST00000416747 285 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 TRBVB-201ENST00000477100 408 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 RNU2-35P-201ENST00000516446 142 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 AC069503.3-201ENST00000618674 145 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 AC139792.2-201ENST00000624218 587 ntBASIC-0.63□□□□□ -2.51
VCX3AQ9NNX9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 SNORA25.7-201ENST00000364375 127 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 RNU6-690P-201ENST00000365242 106 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 MIR206-201ENST00000384872 86 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 AC113195.1-201ENST00000579952 141 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 MIR4795-201ENST00000584182 89 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 RNU6-524P-201ENST00000384270 107 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MIR329-2-201ENST00000385029 84 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MIR519E-201ENST00000385075 84 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 AC093423.1-201ENST00000440817 142 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MTND3P22-201ENST00000510932 243 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 RNA5SP236-201ENST00000516169 116 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MIR548AG2-201ENST00000581228 64 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MIR4744-201ENST00000581563 82 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 MIR4282-201ENST00000583613 67 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms