Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 RNU7-137P-201ENST00000516788 62 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 RNU7-188P-201ENST00000517063 64 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 MIR3920-201ENST00000581751 86 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 MIR4493-201ENST00000584016 73 ntBASIC-0.62□□□□□ -2.51
LRRC40Q9H9A6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 RNU6-449P-201ENST00000383914 107 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 ELOCP20-201ENST00000422460 345 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 MIR1270-201ENST00000459320 83 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 SERF1AP1-201ENST00000514575 187 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 SNORD67.1-201ENST00000516618 108 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 SCARNA15-202ENST00000516881 127 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 MIR604-201ENST00000384880 94 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 MIR599-201ENST00000385069 95 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 RNU6-175P-201ENST00000516896 107 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 MIR4636-201ENST00000582271 80 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 MIR4473-201ENST00000583731 91 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 MIR4263-201ENST00000584745 83 ntBASIC-0.64□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 SNORA32-201ENST00000384072 121 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 RNU6-561P-201ENST00000516222 102 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 MIR548H5-201ENST00000580314 60 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 MIR548AG2-201ENST00000581228 64 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 MIR548AE1-201ENST00000583292 70 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 AC006504.6-201ENST00000590142 199 ntBASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
LRRC40Q9H9A6 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 SNORA25.7-201ENST00000364375 127 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 RNU6-728P-201ENST00000365375 104 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 Z95118.1-201ENST00000421372 247 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 RNU6-758P-201ENST00000516292 89 ntBASIC-0.66□□□□□ -2.52
LRRC40Q9H9A6 MIR369-201ENST00000362155 70 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 RNU6-509P-201ENST00000363519 107 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 RNU1-141P-201ENST00000364623 158 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 RNU6-806P-201ENST00000365147 105 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 RNA5SP144-201ENST00000410846 116 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 AC097635.1-201ENST00000450678 155 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 AC082651.2-201ENST00000496833 166 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 AC098479.1-201ENST00000609225 154 ntBASIC-0.67□□□□□ -2.52
LRRC40Q9H9A6 RNU4-84P-201ENST00000364200 139 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 MIR181B2-201ENST00000385004 89 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 AL603914.1-201ENST00000401964 204 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 AC093423.1-201ENST00000440817 142 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 RNU7-113P-201ENST00000459273 62 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 U4.1-201ENST00000620349 87 ntBASIC-0.68□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-429P-201ENST00000384582 108 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 MIR224-201ENST00000384889 81 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNA5SP33-201ENST00000516687 98 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 RNU6-570P-201ENST00000517051 105 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 MTND5P40-201ENST00000559945 246 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 MIR548AE2-201ENST00000583456 67 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 AC096720.1-201ENST00000604441 183 ntBASIC-0.69□□□□□ -2.52
LRRC40Q9H9A6 SNORD115-2-201ENST00000362842 82 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 SNORD115-20-201ENST00000365099 82 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 RNU6-455P-201ENST00000384681 107 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 AL022718.1-201ENST00000412004 84 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 SNORD116-25-201ENST00000516517 92 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 MIR4795-201ENST00000584182 89 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 RNU7-10P-201ENST00000607194 63 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.7□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.71□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.71□□□□□ -2.52
LRRC40Q9H9A6 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 255.5 ms