Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC0.85□□□□□ -2.27
KRTAP4-4Q9BYR3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.79-201ENST00000362992 113 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD114-13-201ENST00000364377 74 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SKP153-201ENST00000365026 316 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA62.3-201ENST00000365110 153 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AL359837.1-201ENST00000381357 287 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR137-201ENST00000385223 102 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR29C-201ENST00000385231 88 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR601-201ENST00000385256 79 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD19-201ENST00000391191 68 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR298-201ENST00000401212 88 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP95-201ENST00000410319 137 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP484-201ENST00000458857 111 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL323P-201ENST00000494712 295 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-863P-201ENST00000515989 104 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA70.19-201ENST00000516717 90 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA31.14-201ENST00000516728 116 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-45P-201ENST00000517191 141 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 IGKV1-32-201ENST00000519290 311 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR5699-201ENST00000578903 90 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA74C-1-201ENST00000580726 201 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4420-201ENST00000583944 77 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR3138-201ENST00000585238 82 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AL773524.1-201ENST00000614065 229 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AC114781.5-201ENST00000615297 108 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AL445584.3-201ENST00000617173 78 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 uc_338.16-201ENST00000621804 95 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 uc_338.7-201ENST00000621834 124 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 AC068724.3-201ENST00000625906 87 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR6516-201ENST00000630554 81 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 U6.97-201ENST00000636904 101 ntBASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-4Q9BYR3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC0.84□□□□□ -2.28
KRTAP4-4Q9BYR3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC0.84□□□□□ -2.28
KRTAP4-4Q9BYR3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
KRTAP4-4Q9BYR3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
KRTAP4-4Q9BYR3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
KRTAP4-4Q9BYR3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR372-201ENST00000362225 67 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-502P-201ENST00000362419 108 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNY4P27-201ENST00000363341 96 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP87-201ENST00000384155 118 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA70.9-201ENST00000384370 135 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR7-3-201ENST00000384898 110 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-482P-201ENST00000391068 107 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 AC004975.1-201ENST00000428733 208 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 AC092427.1-202ENST00000430569 476 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU7-23P-201ENST00000459465 62 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 S100A11P2-201ENST00000467589 312 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RPS26P28-201ENST00000470806 348 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 S100A11P1-201ENST00000477525 312 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 AC023424.1-201ENST00000496058 459 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU4-60P-201ENST00000517239 135 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR3664-201ENST00000579074 99 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4464-201ENST00000580818 92 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 AC006272.2-201ENST00000594725 163 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 AL391358.1-201ENST00000605342 190 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RN7SL660P-201ENST00000614852 299 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6780A-201ENST00000615089 68 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6888-201ENST00000621977 67 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6086-201ENST00000638065 55 ntBASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms