Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.74□□□□□ -2.85
ABCA3Q99758 RNU6-397P-201ENST00000516226 104 ntBASIC-2.74□□□□□ -2.85
ABCA3Q99758 AC099654.14-201ENST00000638599 341 ntBASIC-2.74□□□□□ -2.85
ABCA3Q99758 SNORD116-11-201ENST00000383882 92 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 RNU2-55P-201ENST00000411146 174 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 AC083798.1-201ENST00000472671 131 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 SEPT14P4-201ENST00000513445 186 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 MIR3913-1-201ENST00000577744 102 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 MIR5701-3-201ENST00000578890 82 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 MIR5701-1-201ENST00000585138 82 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 AC006504.6-201ENST00000590142 199 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 AP001542.1-201ENST00000591314 200 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 MIR5701-2-201ENST00000615634 82 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 AC092794.2-201ENST00000620933 563 ntBASIC-2.75□□□□□ -2.85
ABCA3Q99758 RNU6-874P-201ENST00000362390 105 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 RNU6-842P-201ENST00000384269 107 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 RNU2-72P-201ENST00000411175 163 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 RNU6-899P-201ENST00000363947 107 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 MIR516A2-201ENST00000384888 90 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 MIR516A1-201ENST00000385033 90 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 RPS3AP52-201ENST00000435639 297 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 AP003461.1-201ENST00000528866 78 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 MIR466-201ENST00000580653 84 ntBASIC-2.76□□□□□ -2.85
ABCA3Q99758 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 Y_RNA.381-201ENST00000365666 102 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MTND4P28-201ENST00000426217 387 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MTCO2P4-201ENST00000517968 247 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR4748-201ENST00000578076 82 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR4509-3-201ENST00000578671 94 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR4509-2-201ENST00000583920 94 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR3942-201ENST00000585264 109 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR548O2-201ENST00000616090 70 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MIR4509-1-201ENST00000618224 94 ntBASIC-2.77□□□□□ -2.85
ABCA3Q99758 MTCO2P24-201ENST00000515611 426 ntBASIC-2.78□□□□□ -2.85
ABCA3Q99758 MIR6888-201ENST00000621977 67 ntBASIC-2.78□□□□□ -2.85
ABCA3Q99758 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 Y_RNA.304-201ENST00000365011 112 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 AC090616.4-201ENST00000448026 115 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.79□□□□□ -2.86
ABCA3Q99758 AL359881.1-201ENST00000602916 267 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 AC133104.2-201ENST00000615272 193 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 MTND1P2-201ENST00000430604 821 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 AL157392.4-201ENST00000609756 345 ntBASIC-2.79□□□□□ -2.86
ABCA3Q99758 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.8□□□□□ -2.86
ABCA3Q99758 AC097510.1-201ENST00000510945 133 ntBASIC-2.8□□□□□ -2.86
ABCA3Q99758 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-2.8□□□□□ -2.86
ABCA3Q99758 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 SNORD115-22-201ENST00000364456 82 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 SNORA69.1-201ENST00000390904 137 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 RNU6-256P-201ENST00000516747 97 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 MIR4724-201ENST00000579485 89 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 AC011476.5-201ENST00000615594 130 ntBASIC-2.81□□□□□ -2.86
ABCA3Q99758 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 RNU6-80P-201ENST00000384195 107 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 RNU6-21P-201ENST00000384710 107 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 RNU6-297P-201ENST00000384636 107 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 AL353691.2-201ENST00000443795 59 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 MTND2P39-201ENST00000457230 764 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 RNU6-850P-201ENST00000516934 103 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.82□□□□□ -2.86
ABCA3Q99758 MIR4464-201ENST00000580818 92 ntBASIC-2.82□□□□□ -2.86
ABCA3Q99758 RNU6-664P-201ENST00000362381 107 ntBASIC-2.83□□□□□ -2.86
ABCA3Q99758 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.83□□□□□ -2.86
ABCA3Q99758 MIR181A1-201ENST00000385026 110 ntBASIC-2.83□□□□□ -2.86
ABCA3Q99758 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2.83□□□□□ -2.86
ABCA3Q99758 FGF7P4-201ENST00000509595 295 ntBASIC-2.83□□□□□ -2.86
ABCA3Q99758 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 Y_RNA.231-201ENST00000364358 102 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 PMCHL1-202ENST00000423102 261 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 MIR2053-201ENST00000459295 91 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 RN7SKP295-201ENST00000517264 153 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 MIR5692C2-201ENST00000577959 77 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.84□□□□□ -2.86
ABCA3Q99758 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.85□□□□□ -2.86
ABCA3Q99758 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.85□□□□□ -2.86
ABCA3Q99758 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.85□□□□□ -2.86
ABCA3Q99758 AL021368.1-201ENST00000607490 540 ntBASIC-2.85□□□□□ -2.86
ABCA3Q99758 RNU6-1205P-201ENST00000363625 106 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 RNU6-522P-201ENST00000364497 107 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 RNU6-308P-201ENST00000390957 107 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 MTCO2P19-201ENST00000427513 598 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 MRPS36P3-201ENST00000519284 130 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 AC013791.1-201ENST00000616619 62 ntBASIC-2.85□□□□□ -2.87
ABCA3Q99758 SNORD113-6-201ENST00000363345 75 ntBASIC-2.86□□□□□ -2.87
ABCA3Q99758 AL593851.1-201ENST00000426171 157 ntBASIC-2.86□□□□□ -2.87
ABCA3Q99758 AC009779.6-201ENST00000603972 165 ntBASIC-2.86□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms