Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 SNORD78.1-201ENST00000390866 65 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 U8.15-201ENST00000390947 134 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 RNU6-402P-201ENST00000410678 103 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 RNU6-322P-201ENST00000516010 103 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.685-201ENST00000516532 108 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 RNU6-638P-201ENST00000516582 104 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.44□□□□□ -2.18
ZNF48Q96MX3 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ZNF48Q96MX3 SNORD114-10-201ENST00000363409 72 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD116-10-201ENST00000363791 102 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 RNU6-219P-201ENST00000364728 107 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 RNU6-865P-201ENST00000364772 107 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD58A-201ENST00000383875 65 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD116-22-201ENST00000384430 92 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD38B-201ENST00000384690 67 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD41-201ENST00000386967 70 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 RPS29P28-201ENST00000446439 141 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 AC009474.2-201ENST00000451383 136 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD111.1-201ENST00000516421 86 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 AC103810.7-201ENST00000607821 91 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 IGLL4P-201ENST00000614590 133 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 SNORD38B-202ENST00000625943 69 ntBASIC1.43□□□□□ -2.18
ZNF48Q96MX3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNA5SP48-201ENST00000363969 126 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNY1P13-201ENST00000365030 105 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNA5SP259-201ENST00000365541 109 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-447P-201ENST00000410293 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-355P-201ENST00000410427 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-791P-201ENST00000410467 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-705P-201ENST00000410601 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-860P-201ENST00000410860 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-785P-201ENST00000411324 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-267P-201ENST00000516714 103 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 RNU6-86P-201ENST00000606534 107 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 U6.90-201ENST00000614007 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 U6.70-201ENST00000620287 104 ntBASIC1.42□□□□□ -2.18
ZNF48Q96MX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ZNF48Q96MX3 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 RNU6-228P-201ENST00000362700 106 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 RNU6-497P-201ENST00000365316 104 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 RNU7-48P-201ENST00000458875 63 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 AC141846.1-201ENST00000568348 142 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 MIR4668-201ENST00000582284 70 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
ZNF48Q96MX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ZNF48Q96MX3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ZNF48Q96MX3 MIR548G-201ENST00000408442 89 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 RNA5SP247-201ENST00000411181 105 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 RPL39P39-201ENST00000455840 151 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 RNU6-922P-201ENST00000516753 99 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 MIR4419B-201ENST00000577260 68 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 MIR5588-201ENST00000581890 63 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 AL096861.1-201ENST00000610899 123 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 AL662814.1-201ENST00000617364 121 ntBASIC1.4□□□□□ -2.19
ZNF48Q96MX3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNU6-1276P-201ENST00000365372 104 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNU6-979P-201ENST00000383896 107 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNU6-1124P-201ENST00000384169 107 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNU6-242P-201ENST00000384359 107 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 MIR1302-7-201ENST00000408841 72 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNA5SP237-201ENST00000410414 113 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 AC244023.1-201ENST00000426884 112 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 AC019176.1-201ENST00000518519 225 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 AC015688.6-201ENST00000577737 104 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 AC242498.1-201ENST00000604134 111 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 RNU6-90P-201ENST00000606352 106 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 AP001362.1-201ENST00000625165 124 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 MIR3202-2-201ENST00000635980 79 ntBASIC1.39□□□□□ -2.19
ZNF48Q96MX3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
ZNF48Q96MX3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.38□□□□□ -2.19
ZNF48Q96MX3 SNORD48-201ENST00000364953 64 ntBASIC1.38□□□□□ -2.19
ZNF48Q96MX3 RNY1P4-201ENST00000384595 115 ntBASIC1.38□□□□□ -2.19
ZNF48Q96MX3 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
ZNF48Q96MX3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.38□□□□□ -2.19
ZNF48Q96MX3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms