Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU7-161P-201ENST00000517289 62 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU6-728P-201ENST00000365375 104 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 MIR106A-201ENST00000384870 81 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU6-651P-201ENST00000411040 105 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 AC244505.6-201ENST00000452829 130 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 MTND5P22-201ENST00000458380 195 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 AC082651.2-201ENST00000496833 166 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU7-35P-201ENST00000517174 62 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 RNU2-60P-201ENST00000517290 128 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.46□□□□□ -2.48
USP47Q96K76 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
USP47Q96K76 RNU7-104P-201ENST00000459398 79 ntBASIC-0.46□□□□□ -2.48
USP47Q96K76 MIR4677-201ENST00000584153 80 ntBASIC-0.46□□□□□ -2.48
USP47Q96K76 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 AC074198.2-201ENST00000508153 258 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 SCARNA15-202ENST00000516881 127 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 RNU6-988P-201ENST00000519081 107 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 AC138749.4-201ENST00000563970 127 ntBASIC-0.47□□□□□ -2.49
USP47Q96K76 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.48□□□□□ -2.49
USP47Q96K76 AC113618.1-201ENST00000416747 285 ntBASIC-0.48□□□□□ -2.49
USP47Q96K76 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 RNU7-113P-201ENST00000459273 62 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 SNORD116-25-201ENST00000516517 92 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 RNA5SP33-201ENST00000516687 98 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 uc_338.28-201ENST00000612082 187 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 AL365265.1-201ENST00000621045 234 ntBASIC-0.49□□□□□ -2.49
USP47Q96K76 SNORA32-201ENST00000384072 121 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 RNU6-474P-201ENST00000384243 107 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 RNU6-381P-201ENST00000391259 108 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 SNORD2.1-201ENST00000458762 69 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 MIR6514-201ENST00000622549 70 ntBASIC-0.5□□□□□ -2.49
USP47Q96K76 RNA5SP403-201ENST00000363598 108 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 MIR548H5-201ENST00000580314 60 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 MIR378D2-201ENST00000580636 98 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 AC073869.9-201ENST00000641610 120 ntBASIC-0.51□□□□□ -2.49
USP47Q96K76 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 MT-TD-201ENST00000387419 68 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 SNORD41.1-201ENST00000391000 69 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 SNORA75.1-201ENST00000391130 148 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 RNU4-43P-201ENST00000410628 137 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 RNA5SP144-201ENST00000410846 116 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 AL121914.1-201ENST00000450188 156 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 SNORD67.1-201ENST00000516618 108 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 RNU6-570P-201ENST00000517051 105 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 AL442663.2-201ENST00000554385 511 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 AC113195.1-201ENST00000579952 141 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 AC006504.6-201ENST00000590142 199 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 AC011921.3-201ENST00000605540 361 ntBASIC-0.52□□□□□ -2.49
USP47Q96K76 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 RNY1P2-201ENST00000364820 117 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 RNY1P6-201ENST00000384193 109 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 SNORD110-201ENST00000408189 75 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 RNU7-137P-201ENST00000516788 62 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 AL356055.1-201ENST00000602528 446 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 AC084368.1-201ENST00000620935 65 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.53□□□□□ -2.49
USP47Q96K76 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
USP47Q96K76 RNU6-429P-201ENST00000384582 108 ntBASIC-0.54□□□□□ -2.5
USP47Q96K76 MT-TQ-201ENST00000387372 72 ntBASIC-0.54□□□□□ -2.5
USP47Q96K76 CR383656.4-201ENST00000546909 122 ntBASIC-0.54□□□□□ -2.5
USP47Q96K76 MIR548S-201ENST00000581352 82 ntBASIC-0.54□□□□□ -2.5
USP47Q96K76 AC105081.1-201ENST00000617727 106 ntBASIC-0.54□□□□□ -2.5
USP47Q96K76 SNORD115-2-201ENST00000362842 82 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 RNU6-978P-201ENST00000364371 103 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 SNORD115-20-201ENST00000365099 82 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 SNORA32.3-201ENST00000384772 121 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 MIR635-201ENST00000384830 98 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 MIR624-201ENST00000385217 97 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 AC006210.1-201ENST00000424882 111 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 SNORD57-201ENST00000448188 72 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 RNY1P9-201ENST00000532431 109 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms