Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 U7.3-201ENST00000616123 62 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.95-201ENST00000363079 95 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-1134P-201ENST00000365156 101 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 MIR206-201ENST00000384872 86 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 MIR450A2-201ENST00000385022 100 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 AP1B1P2-201ENST00000416196 106 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 UBL5P1-201ENST00000507979 193 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 CYP3A52P-201ENST00000563326 91 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 MIR4251-201ENST00000635819 61 ntBASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.6□□□□□ -2.15
SIMC1Q8NDZ2 MIR489-201ENST00000384923 84 ntBASIC1.6□□□□□ -2.15
SIMC1Q8NDZ2 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
SIMC1Q8NDZ2 RN7SKP12-201ENST00000516275 143 ntBASIC1.6□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
SIMC1Q8NDZ2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.17-201ENST00000362433 111 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.247-201ENST00000364500 92 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 RNA5SP173-201ENST00000364857 136 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-820P-201ENST00000384273 107 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.593-201ENST00000410292 98 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 MRPL35P3-201ENST00000421557 364 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 RNU7-79P-201ENST00000516082 62 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 SNORD67.1-201ENST00000516618 108 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 AC096720.1-201ENST00000604441 183 ntBASIC1.59□□□□□ -2.15
SIMC1Q8NDZ2 MIR494-201ENST00000349529 81 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 SNORD41-201ENST00000386967 70 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 AC109327.2-201ENST00000448339 378 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1006P-201ENST00000516998 103 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 MIR376B-201ENST00000614515 100 ntBASIC1.58□□□□□ -2.16
SIMC1Q8NDZ2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 Y_RNA.190-201ENST00000363964 101 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-573P-201ENST00000383938 106 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 SNORD38B-201ENST00000384690 67 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-592P-201ENST00000411333 103 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 SNORD38B-202ENST00000625943 69 ntBASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.57□□□□□ -2.16
SIMC1Q8NDZ2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 MIR34C-201ENST00000384831 77 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-887P-201ENST00000410660 100 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 SNORD111.1-201ENST00000516421 86 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-922P-201ENST00000516753 99 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 RNU7-137P-201ENST00000516788 62 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 AL512310.8-201ENST00000550183 120 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 MIR4439-201ENST00000583746 80 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 MIR3192-201ENST00000584920 77 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 AC105081.1-201ENST00000617727 106 ntBASIC1.56□□□□□ -2.16
SIMC1Q8NDZ2 SNORD114-10-201ENST00000363409 72 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1152P-201ENST00000384576 107 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-972P-201ENST00000391208 107 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
SIMC1Q8NDZ2 SNORD38.1-201ENST00000363863 68 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 RNY1P13-201ENST00000365030 105 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-813P-201ENST00000384691 107 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 AC244023.1-201ENST00000426884 112 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 AC242498.1-201ENST00000604134 111 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 AL096861.1-201ENST00000610899 123 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 MIR1245B-201ENST00000636115 69 ntBASIC1.54□□□□□ -2.16
SIMC1Q8NDZ2 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-865P-201ENST00000364772 107 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 MIR1302-7-201ENST00000408841 72 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 RPS29P28-201ENST00000446439 141 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 AC141846.1-201ENST00000568348 142 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 RNU6-86P-201ENST00000606534 107 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 SEPT14P17-201ENST00000617978 177 ntBASIC1.53□□□□□ -2.16
SIMC1Q8NDZ2 SNORD58A-201ENST00000383875 65 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms