Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.65□□□□□ -2.31
RTL3Q8N8U3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNY1P13-201ENST00000365030 105 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MIR125B2-201ENST00000385128 89 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNA5SP237-201ENST00000410414 113 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MTND4LP9-201ENST00000427694 174 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MIR1270-201ENST00000459320 83 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 AL137067.1-201ENST00000615933 120 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.114-201ENST00000363265 113 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNU6-647P-201ENST00000364243 107 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD50.2-201ENST00000365465 70 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RTL3Q8N8U3 U8.15-201ENST00000390947 134 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNU6-346P-201ENST00000516288 111 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNY4P20-201ENST00000516678 93 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNA5SP480-201ENST00000516840 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD92-201ENST00000585078 85 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.343-201ENST00000365354 112 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-746P-201ENST00000384112 109 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-257P-201ENST00000410238 98 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 AL158147.1-201ENST00000443970 75 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU7-79P-201ENST00000516082 62 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNA5SP272-201ENST00000516095 111 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNA5SP33-201ENST00000516687 98 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.703-201ENST00000516846 111 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 MIR548AE2-201ENST00000583456 67 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RTL3Q8N8U3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RN7SKP19-201ENST00000516016 252 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU6-1104P-201ENST00000384723 104 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 MIR520F-201ENST00000384824 87 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 SNORA40-201ENST00000388090 126 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.586-201ENST00000391146 98 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU4-69P-201ENST00000410677 143 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 RNA5SP136-201ENST00000410906 107 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 RNU7-137P-201ENST00000516788 62 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC022523.2-201ENST00000561045 150 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 MIR3133-201ENST00000583157 78 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AL359881.1-201ENST00000602916 267 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RTL3Q8N8U3 SNORD100-201ENST00000408573 76 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 SNORD93-201ENST00000408813 74 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU6-765P-201ENST00000516916 99 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 MIR4491-201ENST00000581087 68 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
RTL3Q8N8U3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORD114-10-201ENST00000363409 72 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU6-704P-201ENST00000364162 103 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORA32-201ENST00000384072 121 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 MT-TI-201ENST00000387365 69 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU5E-3P-201ENST00000515913 68 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORD115-19-201ENST00000363098 82 ntBASIC0.56□□□□□ -2.32
RTL3Q8N8U3 SNORD115-18-201ENST00000363293 82 ntBASIC0.56□□□□□ -2.32
RTL3Q8N8U3 Y_RNA.198-201ENST00000364013 98 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms