Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 SNORD115-17-201ENST00000364612 82 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 RNU6-168P-201ENST00000516189 101 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 AC068339.1-201ENST00000526965 141 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 SNORA18-201ENST00000384416 132 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 SNORD12-201ENST00000391002 90 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 MIR5009-201ENST00000578736 100 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 MIR548AE2-201ENST00000583456 67 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 AL162726.3-218ENST00000636401 95 ntBASIC1.5□□□□□ -2.17
SYNPOQ8N3V7 RNU6-766P-201ENST00000362478 107 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 RNU6-32P-201ENST00000383948 107 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 SNORA32-201ENST00000384072 121 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 RNU6-13P-201ENST00000384248 107 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.495-201ENST00000384435 112 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 RNU6-12P-201ENST00000384604 107 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 RNU6-41P-201ENST00000384741 107 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 RNU4-69P-201ENST00000410677 143 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 snoU13.2-201ENST00000459201 104 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 AC036111.3-201ENST00000526389 112 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 MIR6740-201ENST00000618268 113 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 MIR1255B1-201ENST00000636325 63 ntBASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.309-201ENST00000365046 111 ntBASIC1.48□□□□□ -2.17
SYNPOQ8N3V7 SNORD111-201ENST00000408139 94 ntBASIC1.48□□□□□ -2.17
SYNPOQ8N3V7 MIR1302-5-201ENST00000408164 150 ntBASIC1.48□□□□□ -2.17
SYNPOQ8N3V7 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
SYNPOQ8N3V7 AC027335.2-201ENST00000624030 375 ntBASIC1.48□□□□□ -2.17
SYNPOQ8N3V7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 SNORA51.5-201ENST00000384126 131 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-342P-201ENST00000384521 104 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 MIR489-201ENST00000384923 84 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-816P-201ENST00000390914 107 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-1268P-201ENST00000391214 107 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-1239P-201ENST00000391310 107 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 RNU6-537P-201ENST00000517277 103 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 SNORA4-201ENST00000584302 138 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 AC106800.4-201ENST00000614905 153 ntBASIC1.47□□□□□ -2.17
SYNPOQ8N3V7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 SNORA19.1-201ENST00000410656 129 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 SNORD83.1-201ENST00000411362 77 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 AC067940.1-201ENST00000458411 300 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 snoU13.21-201ENST00000459368 105 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 MIR4452-201ENST00000583004 71 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
SYNPOQ8N3V7 RNU6-363P-201ENST00000362895 105 ntBASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 MIR1912-201ENST00000410389 80 ntBASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 AL353813.1-201ENST00000440700 253 ntBASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 AC012676.2-201ENST00000619258 186 ntBASIC1.45□□□□□ -2.18
SYNPOQ8N3V7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 Y_RNA.78-201ENST00000362970 110 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 RNU6-616P-201ENST00000384353 107 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 MIR590-201ENST00000385008 97 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 MIR942-201ENST00000401111 86 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 RNU6-904P-201ENST00000516206 101 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 RNA5SP170-201ENST00000517150 101 ntBASIC1.44□□□□□ -2.18
SYNPOQ8N3V7 RNU6-640P-201ENST00000363693 105 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 RNU6-934P-201ENST00000365154 107 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 RNU6-905P-201ENST00000384434 107 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 AC015818.7-201ENST00000428754 109 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 AC087499.7-201ENST00000441958 109 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 Y_RNA.677-201ENST00000516401 85 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 RNA5SP404-201ENST00000517118 132 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 MIR4771-2-201ENST00000577758 74 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 MIR4771-1-201ENST00000582617 74 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 uc_338.6-201ENST00000613544 171 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 AP001318.4-201ENST00000616637 121 ntBASIC1.43□□□□□ -2.18
SYNPOQ8N3V7 Y_RNA.43-201ENST00000362670 111 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 RNU4-67P-201ENST00000364569 141 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 SNORD77B-201ENST00000391112 67 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 SNORD124-201ENST00000459577 104 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 RNU7-35P-201ENST00000517174 62 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 AL662814.1-201ENST00000617364 121 ntBASIC1.42□□□□□ -2.18
SYNPOQ8N3V7 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
SYNPOQ8N3V7 RNU6-1113P-201ENST00000384348 107 ntBASIC1.41□□□□□ -2.18
SYNPOQ8N3V7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.41□□□□□ -2.18
SYNPOQ8N3V7 MIR605-201ENST00000385078 83 ntBASIC1.41□□□□□ -2.18
SYNPOQ8N3V7 MIR100-201ENST00000385259 80 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms