Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR4305-201ENST00000583252 102 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 MIR6082-201ENST00000613604 109 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 Y_RNA.13-201ENST00000362403 112 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 Y_RNA.120-201ENST00000363304 110 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 Y_RNA.272-201ENST00000364696 102 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 RNU4-11P-201ENST00000365287 132 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 SNORA32-201ENST00000384072 121 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 MIR598-201ENST00000384868 97 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 AC096949.1-201ENST00000412047 152 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
LDB1Q86U70 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.5□□□□□ -2.33
LDB1Q86U70 RNU6-151P-201ENST00000364158 107 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 SNORA72.6-201ENST00000384520 129 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 Y_RNA.531-201ENST00000384589 121 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 RNU6-679P-201ENST00000391003 106 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 AL512326.2-201ENST00000426359 151 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 Y_RNA.686-201ENST00000516548 134 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 RNU6-182P-201ENST00000516970 105 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 AC133485.4-201ENST00000561835 220 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 AC138907.4-201ENST00000570107 226 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 AC021443.1-201ENST00000604478 211 ntBASIC0.49□□□□□ -2.33
LDB1Q86U70 RNU6-309P-201ENST00000364573 106 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 RNU6-1130P-201ENST00000365434 107 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 Y_RNA.617-201ENST00000410920 90 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 RNU2-35P-201ENST00000516446 142 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 Y_RNA.690-201ENST00000516603 95 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 AC112693.2-201ENST00000556538 232 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
LDB1Q86U70 Y_RNA.8-201ENST00000362353 102 ntBASIC0.47□□□□□ -2.33
LDB1Q86U70 SNORD116-18-201ENST00000383961 92 ntBASIC0.47□□□□□ -2.33
LDB1Q86U70 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.47□□□□□ -2.33
LDB1Q86U70 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.47□□□□□ -2.33
LDB1Q86U70 Y_RNA.150-201ENST00000363562 102 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 Y_RNA.251-201ENST00000364551 99 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 RNU6-449P-201ENST00000383914 107 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 RNU6-804P-201ENST00000384286 107 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 AL603914.1-201ENST00000401964 204 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 RNU7-164P-201ENST00000459221 62 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 Y_RNA.651-201ENST00000459380 103 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 RNU6-469P-201ENST00000516253 101 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 MIR548AE2-201ENST00000583456 67 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
LDB1Q86U70 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
LDB1Q86U70 Y_RNA.174-201ENST00000363781 105 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 Y_RNA.270-201ENST00000364693 104 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 RNU6-460P-201ENST00000391158 108 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 SNORA25.16-201ENST00000516741 121 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 Y_RNA.778-201ENST00000620203 90 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 PVT1_3.1-201ENST00000620853 95 ntBASIC0.45□□□□□ -2.34
LDB1Q86U70 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
LDB1Q86U70 Y_RNA.366-201ENST00000365540 102 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 RNU7-123P-201ENST00000515911 60 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 DEFB131E-201ENST00000532329 154 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
LDB1Q86U70 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 Y_RNA.299-201ENST00000364973 94 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 Y_RNA.697-201ENST00000516776 113 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
LDB1Q86U70 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 MIR613-201ENST00000385248 95 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 MIR513C-201ENST00000401352 84 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 RNU6-394P-201ENST00000410735 107 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 SNORD71-201ENST00000411292 86 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 SNORD67.1-201ENST00000516618 108 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 RNU6-135P-201ENST00000516769 101 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 RNU7-137P-201ENST00000516788 62 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 MIR3144-201ENST00000579460 79 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 AC108081.1-201ENST00000604358 221 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 AC105081.1-201ENST00000617727 106 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 FTX_2.1-201ENST00000618816 94 ntBASIC0.42□□□□□ -2.34
LDB1Q86U70 RNU4-58P-201ENST00000363192 141 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 RNA5SP133-201ENST00000363368 119 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 SNORD114-10-201ENST00000363409 72 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 RNU6-915P-201ENST00000364943 103 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 Y_RNA.298-201ENST00000364960 107 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 Y_RNA.398-201ENST00000383952 99 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 Y_RNA.567-201ENST00000384736 106 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 MIR216A-201ENST00000385063 110 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 MIR644A-201ENST00000385262 94 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 Y_RNA.580-201ENST00000391004 95 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 RNU4-69P-201ENST00000410677 143 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
LDB1Q86U70 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 SNORA31.14-201ENST00000516728 116 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms