Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DEFB131E-201ENST00000532329 154 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 uc_338.6-201ENST00000613544 171 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 MIR6740-201ENST00000618268 113 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 MIR6516-201ENST00000630554 81 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 MIR4679-1-201ENST00000637619 75 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 AC091304.10-201ENST00000641554 121 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.369-201ENST00000365568 117 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 RNU6-49P-201ENST00000384256 107 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 SCARNA23-201ENST00000516060 130 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 SNORA40.13-201ENST00000516379 120 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 AL512310.8-201ENST00000550183 120 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 AC141846.1-201ENST00000568348 142 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 AC012531.4-201ENST00000616509 177 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 AL662814.1-201ENST00000617364 121 ntBASIC1.26□□□□□ -2.21
ZNF549Q6P9A3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 RNA5SP264-201ENST00000363115 107 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 MT-TN-201ENST00000387400 73 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 AC096949.1-201ENST00000412047 152 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 MIR548Z-201ENST00000584743 97 ntBASIC1.25□□□□□ -2.21
ZNF549Q6P9A3 MIR30D-201ENST00000362283 70 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 RNU6-170P-201ENST00000362832 104 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 SNORD114-10-201ENST00000363409 72 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 RNU4-36P-201ENST00000364294 144 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 MIR34C-201ENST00000384831 77 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 RNY4P30-201ENST00000410216 95 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 RNU6-613P-201ENST00000410412 108 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 MIR4777-201ENST00000583710 86 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 AL442128.1-201ENST00000615151 90 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 AC105081.1-201ENST00000617727 106 ntBASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6-396P-201ENST00000365369 105 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU6-795P-201ENST00000516323 103 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 RNU11-2P-201ENST00000516898 142 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 MIR3937-201ENST00000580135 106 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 MIR4264-201ENST00000583520 66 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
ZNF549Q6P9A3 MIR377-201ENST00000362145 69 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 RNU6-205P-201ENST00000390858 107 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 AC004941.2-201ENST00000427009 228 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 MIR2115-201ENST00000516657 100 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ZNF549Q6P9A3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 TRMT112P2-201ENST00000512910 132 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 AP000753.3-201ENST00000604083 169 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 SEPT14P17-201ENST00000617978 177 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 MALAT1.1-201ENST00000618249 95 ntBASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ZNF549Q6P9A3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 RNY1P7-201ENST00000384743 110 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 RNU6-644P-201ENST00000391155 98 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 RNU6-321P-201ENST00000410912 106 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 AL512310.12-203ENST00000640543 90 ntBASIC1.2□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms