Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 RNA5SP24-201ENST00000516478 95 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AP003716.2-201ENST00000528260 108 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AC090897.1-201ENST00000580909 226 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-1296P-201ENST00000383879 107 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 MIR181B2-201ENST00000385004 89 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 MIR676-201ENST00000390702 67 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 AC138749.4-201ENST00000563970 127 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 AL513043.2-201ENST00000573941 143 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 MIR3664-201ENST00000579074 99 ntBASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.44□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-654P-201ENST00000364373 107 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-776P-201ENST00000364403 104 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 RNU6-1022P-201ENST00000365049 104 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 RNA5SP95-201ENST00000410319 137 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 RNU1-41P-201ENST00000516161 162 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 RNU1-48P-201ENST00000516400 162 ntBASIC2.43□□□□□ -2.02
TMEM259Q4ZIN3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 RNA5SP133-201ENST00000363368 119 ntBASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 AC245517.4-201ENST00000448601 281 ntBASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 RNA5SP233-201ENST00000459153 113 ntBASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 RNU7-153P-201ENST00000516455 62 ntBASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM259Q4ZIN3 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 HSBP1P2-201ENST00000299671 229 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 SNORA2B-201ENST00000384583 137 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 MT-TF-201ENST00000387314 71 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TMEM259Q4ZIN3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
TMEM259Q4ZIN3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 RNA5SP432-201ENST00000362480 116 ntBASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 SNORA70B-201ENST00000384210 135 ntBASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 Y_RNA.607-201ENST00000410597 98 ntBASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TMEM259Q4ZIN3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.39□□□□□ -2.03
TMEM259Q4ZIN3 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
TMEM259Q4ZIN3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.39□□□□□ -2.03
TMEM259Q4ZIN3 uc_338.6-201ENST00000613544 171 ntBASIC2.39□□□□□ -2.03
TMEM259Q4ZIN3 MIR377-201ENST00000362145 69 ntBASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 AC079804.2-201ENST00000490376 200 ntBASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 AC026436.1-201ENST00000510537 270 ntBASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 AL512310.8-201ENST00000550183 120 ntBASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 MIR3198-2-201ENST00000577868 80 ntBASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
TMEM259Q4ZIN3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 SNORD93-201ENST00000408813 74 ntBASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 Z98742.3-201ENST00000418637 326 ntBASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 RNU6-237P-201ENST00000515985 71 ntBASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 RNU6-165P-201ENST00000517170 99 ntBASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 MIR8066-201ENST00000617280 78 ntBASIC2.37□□□□□ -2.03
TMEM259Q4ZIN3 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 BX276092.1-201ENST00000427368 251 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 AC019288.1-201ENST00000557918 224 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 MIR4712-201ENST00000583750 82 ntBASIC2.36□□□□□ -2.03
TMEM259Q4ZIN3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 RNA5SP425-201ENST00000410336 112 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 RNU4-83P-201ENST00000410863 133 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 MIR18B-201ENST00000454574 71 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 RNU6-850P-201ENST00000516934 103 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 MIR4662A-201ENST00000637499 67 ntBASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMEM259Q4ZIN3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 RNU6-580P-201ENST00000365159 107 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 MIR519C-201ENST00000385053 87 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 RNU1-78P-201ENST00000391248 165 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 MIR1261-201ENST00000408659 82 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 RNA5SP489-201ENST00000410986 109 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 AC087499.7-201ENST00000441958 109 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 RN7SKP88-201ENST00000516847 250 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 7SK.8-201ENST00000612110 250 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 7SK.11-201ENST00000615477 250 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 7SK.13-201ENST00000622040 250 ntBASIC2.34□□□□□ -2.03
TMEM259Q4ZIN3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
TMEM259Q4ZIN3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 321.6 ms