Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.200-201ENST00000364018 102 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.307-201ENST00000365022 117 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.470-201ENST00000384307 117 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.536-201ENST00000384621 113 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 RNU6-768P-201ENST00000384683 107 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 RNU6-535P-201ENST00000384722 107 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 MTND5P34-201ENST00000568888 325 ntBASIC0.23□□□□□ -2.37
GABPAQ06546 Y_RNA.115-201ENST00000363272 98 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 RNU4-67P-201ENST00000364569 141 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 RNU6-1082P-201ENST00000364574 107 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 RNA5SP268-201ENST00000516828 124 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
GABPAQ06546 MIR411-201ENST00000362239 96 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-1020P-201ENST00000363684 107 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-1229P-201ENST00000364295 107 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-690P-201ENST00000365242 106 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-47P-201ENST00000383866 107 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 SNORA32-201ENST00000384072 121 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-574P-201ENST00000384265 107 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 RNU7-35P-201ENST00000517174 62 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 AL109933.3-201ENST00000619095 188 ntBASIC0.21□□□□□ -2.38
GABPAQ06546 Y_RNA.193-201ENST00000363979 102 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 RNU6-312P-201ENST00000364629 107 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 RNU6-818P-201ENST00000364837 108 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 AC107027.2-201ENST00000512197 115 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 RNU6-1194P-201ENST00000516208 104 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 RNU6-531P-201ENST00000516694 104 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 MIR3149-201ENST00000584629 83 ntBASIC0.2□□□□□ -2.38
GABPAQ06546 Y_RNA.120-201ENST00000363304 110 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 RNA5SP133-201ENST00000363368 119 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 Y_RNA.337-201ENST00000365312 102 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 RNU2-59P-201ENST00000410482 191 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 RNA5SP236-201ENST00000516169 116 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 RNA5SP227-201ENST00000516184 113 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 MIR6844-201ENST00000637122 62 ntBASIC0.19□□□□□ -2.38
GABPAQ06546 SNORD115-2-201ENST00000362842 82 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 SNORD115-20-201ENST00000365099 82 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 RNU6-716P-201ENST00000365621 103 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 Y_RNA.435-201ENST00000384095 112 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 Y_RNA.452-201ENST00000384202 108 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 MTATP6P21-201ENST00000440681 189 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 RNU6-1219P-201ENST00000516143 112 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 RNU6-135P-201ENST00000516769 101 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 MIR4305-201ENST00000583252 102 ntBASIC0.18□□□□□ -2.38
GABPAQ06546 RNU4-58P-201ENST00000363192 141 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 RNU6-1099P-201ENST00000363533 107 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 Y_RNA.357-201ENST00000365487 109 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 Y_RNA.531-201ENST00000384589 121 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 RNU6-240P-201ENST00000516098 97 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 AC022559.1-201ENST00000520905 205 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 U6.109-201ENST00000636749 87 ntBASIC0.17□□□□□ -2.38
GABPAQ06546 MIR101-2-201ENST00000362195 79 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 Y_RNA.233-201ENST00000364407 101 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 SNORD28-201ENST00000384706 75 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 SNORA75.5-201ENST00000391291 81 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 RNU6-588P-201ENST00000410281 105 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 Y_RNA.793-201ENST00000411222 111 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 RNA5SP47-201ENST00000517230 109 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 AC112693.2-201ENST00000556538 232 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 MIR548AE2-201ENST00000583456 67 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 MIR7107-201ENST00000611489 80 ntBASIC0.16□□□□□ -2.38
GABPAQ06546 SNORD18B-201ENST00000365659 72 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 Y_RNA.497-201ENST00000384447 98 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 RNU2-35P-201ENST00000516446 142 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 SNORD67.1-201ENST00000516618 108 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.15□□□□□ -2.39
GABPAQ06546 AC138907.4-201ENST00000570107 226 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC130289.1-201ENST00000577321 73 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 MIR4639-201ENST00000584938 69 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC011603.4-201ENST00000611325 277 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC244669.1-204ENST00000621564 178 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 AC091304.10-201ENST00000641554 121 ntBASIC0.15□□□□□ -2.39
GABPAQ06546 RNA5SP245-201ENST00000364239 121 ntBASIC0.14□□□□□ -2.39
GABPAQ06546 AC009779.6-201ENST00000603972 165 ntBASIC0.14□□□□□ -2.39
GABPAQ06546 AC021443.1-201ENST00000604478 211 ntBASIC0.14□□□□□ -2.39
GABPAQ06546 AC105081.1-201ENST00000617727 106 ntBASIC0.14□□□□□ -2.39
GABPAQ06546 MIR6828-201ENST00000636181 60 ntBASIC0.14□□□□□ -2.39
GABPAQ06546 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
GABPAQ06546 Y_RNA.119-201ENST00000363301 96 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 Y_RNA.423-201ENST00000384057 113 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 RNU6-463P-201ENST00000384340 107 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 Y_RNA.489-201ENST00000384410 101 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 MIRLET7F2-201ENST00000385277 83 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 SNORD37.2-201ENST00000391075 66 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms