Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.6□□□□□ -2.67
HIST1H3AP68431 AL353813.1-201ENST00000440700 253 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.6□□□□□ -2.67
HIST1H3AP68431 AC097510.1-201ENST00000510945 133 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 MIR3165-201ENST00000579874 75 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 PART1_1.1-201ENST00000611761 217 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.6□□□□□ -2.67
HIST1H3AP68431 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 SNORD114-17-201ENST00000364699 75 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 MIR548I2-201ENST00000408348 149 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 MTATP6P19-201ENST00000413797 659 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 MTND1P34-201ENST00000438556 671 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 RPS29P30-201ENST00000600975 111 ntBASIC-1.61□□□□□ -2.67
HIST1H3AP68431 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
HIST1H3AP68431 RNU6-370P-201ENST00000411008 104 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 MIR5688-201ENST00000580619 83 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 AC078883.4-201ENST00000623218 367 ntBASIC-1.62□□□□□ -2.67
HIST1H3AP68431 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNU6-10P-201ENST00000384036 107 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNA5SP144-201ENST00000410846 116 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNU4-14P-201ENST00000410858 122 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNU7-106P-201ENST00000459514 67 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNU6-287P-201ENST00000516230 98 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 AC007012.1-201ENST00000567192 175 ntBASIC-1.63□□□□□ -2.67
HIST1H3AP68431 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.64□□□□□ -2.67
HIST1H3AP68431 SNRPGP8-201ENST00000454064 226 ntBASIC-1.64□□□□□ -2.67
HIST1H3AP68431 U8.20-201ENST00000459445 131 ntBASIC-1.64□□□□□ -2.67
HIST1H3AP68431 AL442663.2-201ENST00000554385 511 ntBASIC-1.64□□□□□ -2.67
HIST1H3AP68431 MIR5690-201ENST00000583739 73 ntBASIC-1.64□□□□□ -2.67
HIST1H3AP68431 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 RNA5SP192-201ENST00000364404 120 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 MIR587-201ENST00000384845 96 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 MIR181A1-201ENST00000385026 110 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 RNU2-16P-201ENST00000410712 136 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 HAR1A.1-201ENST00000459583 118 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 MIR548AE2-201ENST00000583456 67 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 AC048344.4-201ENST00000619744 527 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 MIR4272-201ENST00000635924 64 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 MIR3974-201ENST00000637126 96 ntBASIC-1.65□□□□□ -2.67
HIST1H3AP68431 RNU6-170P-201ENST00000362832 104 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 SNORD115-20-201ENST00000365099 82 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 MIR124-2-201ENST00000385081 109 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 RNU6-706P-201ENST00000517229 104 ntBASIC-1.66□□□□□ -2.68
HIST1H3AP68431 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 MIR582-201ENST00000365731 98 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 RNU6-30P-201ENST00000384561 107 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.67□□□□□ -2.68
HIST1H3AP68431 MTND4P17-201ENST00000470444 350 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 RNU6-570P-201ENST00000517051 105 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 snoR1.1-201ENST00000628177 80 ntBASIC-1.67□□□□□ -2.68
HIST1H3AP68431 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.68□□□□□ -2.68
HIST1H3AP68431 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
HIST1H3AP68431 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.68□□□□□ -2.68
HIST1H3AP68431 RNU6-699P-201ENST00000517081 110 ntBASIC-1.68□□□□□ -2.68
HIST1H3AP68431 AL365205.2-201ENST00000594586 68 ntBASIC-1.68□□□□□ -2.68
HIST1H3AP68431 AL008718.3-201ENST00000610217 321 ntBASIC-1.68□□□□□ -2.68
HIST1H3AP68431 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.68□□□□□ -2.68
HIST1H3AP68431 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 SNORD113-8-201ENST00000363497 74 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 RNY1P6-201ENST00000384193 109 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 MT-TT-201ENST00000387460 66 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 RNU7-48P-201ENST00000458875 63 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 MIR3115-201ENST00000577915 68 ntBASIC-1.69□□□□□ -2.68
HIST1H3AP68431 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 MIR559-201ENST00000385188 96 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 MIR8485-201ENST00000401372 91 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 AL731563.1-201ENST00000442202 214 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 AC082651.2-201ENST00000496833 166 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 RNU6-358P-201ENST00000516564 75 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 RNU6-762P-201ENST00000517107 102 ntBASIC-1.7□□□□□ -2.68
HIST1H3AP68431 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 MIR548E-201ENST00000408287 88 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 RNU7-134P-201ENST00000458997 64 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 SCARNA15-202ENST00000516881 127 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 AC245505.1-201ENST00000556398 224 ntBASIC-1.71□□□□□ -2.68
HIST1H3AP68431 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.72□□□□□ -2.68
HIST1H3AP68431 RNU6-662P-201ENST00000384253 104 ntBASIC-1.72□□□□□ -2.68
HIST1H3AP68431 RNU6-102P-201ENST00000384485 104 ntBASIC-1.72□□□□□ -2.68
HIST1H3AP68431 RNU6-592P-201ENST00000411333 103 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 288.1 ms