Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.244-201ENST00000364484 109 ntBASIC1.94□□□□□ -2.1
YBX1P67809 MIR499A-201ENST00000384903 122 ntBASIC1.94□□□□□ -2.1
YBX1P67809 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
YBX1P67809 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
YBX1P67809 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
YBX1P67809 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
YBX1P67809 AC133485.1-201ENST00000567176 124 ntBASIC1.94□□□□□ -2.1
YBX1P67809 MIR5694-201ENST00000581190 76 ntBASIC1.94□□□□□ -2.1
YBX1P67809 AP001362.1-201ENST00000625165 124 ntBASIC1.94□□□□□ -2.1
YBX1P67809 MIR548BB-201ENST00000626714 66 ntBASIC1.94□□□□□ -2.1
YBX1P67809 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
YBX1P67809 RNU6-509P-201ENST00000363519 107 ntBASIC1.93□□□□□ -2.1
YBX1P67809 MIR518E-201ENST00000385252 88 ntBASIC1.93□□□□□ -2.1
YBX1P67809 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.93□□□□□ -2.1
YBX1P67809 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
YBX1P67809 SNORD111.1-201ENST00000516421 86 ntBASIC1.93□□□□□ -2.1
YBX1P67809 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
YBX1P67809 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
YBX1P67809 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
YBX1P67809 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
YBX1P67809 snoU13.31-201ENST00000607291 104 ntBASIC1.93□□□□□ -2.1
YBX1P67809 AC006160.2-201ENST00000637708 154 ntBASIC1.93□□□□□ -2.1
YBX1P67809 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
YBX1P67809 RNU6-633P-201ENST00000362612 103 ntBASIC1.92□□□□□ -2.1
YBX1P67809 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
YBX1P67809 MIR144-201ENST00000384886 86 ntBASIC1.92□□□□□ -2.1
YBX1P67809 MIR181B2-201ENST00000385004 89 ntBASIC1.92□□□□□ -2.1
YBX1P67809 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
YBX1P67809 RNU6-922P-201ENST00000516753 99 ntBASIC1.92□□□□□ -2.1
YBX1P67809 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
YBX1P67809 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
YBX1P67809 RNU1-17P-201ENST00000363022 152 ntBASIC1.91□□□□□ -2.1
YBX1P67809 Y_RNA.173-201ENST00000363776 113 ntBASIC1.91□□□□□ -2.1
YBX1P67809 RNA5SP48-201ENST00000363969 126 ntBASIC1.91□□□□□ -2.1
YBX1P67809 RNU6-652P-201ENST00000365488 107 ntBASIC1.91□□□□□ -2.1
YBX1P67809 RNU6-480P-201ENST00000384332 107 ntBASIC1.91□□□□□ -2.1
YBX1P67809 AC244023.1-201ENST00000426884 112 ntBASIC1.91□□□□□ -2.1
YBX1P67809 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
YBX1P67809 AL513043.2-201ENST00000573941 143 ntBASIC1.91□□□□□ -2.1
YBX1P67809 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
YBX1P67809 AC242498.1-201ENST00000604134 111 ntBASIC1.91□□□□□ -2.1
YBX1P67809 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
YBX1P67809 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
YBX1P67809 AL662814.1-201ENST00000617364 121 ntBASIC1.91□□□□□ -2.1
YBX1P67809 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
YBX1P67809 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
YBX1P67809 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
YBX1P67809 RNU6-279P-201ENST00000391297 101 ntBASIC1.9□□□□□ -2.11
YBX1P67809 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
YBX1P67809 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
YBX1P67809 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
YBX1P67809 SNORA2B-201ENST00000384583 137 ntBASIC1.89□□□□□ -2.11
YBX1P67809 MIR588-201ENST00000384900 83 ntBASIC1.89□□□□□ -2.11
YBX1P67809 SNORD41-201ENST00000386967 70 ntBASIC1.89□□□□□ -2.11
YBX1P67809 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
YBX1P67809 AL161932.1-201ENST00000437408 146 ntBASIC1.89□□□□□ -2.11
YBX1P67809 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
YBX1P67809 RNU6-857P-201ENST00000515893 110 ntBASIC1.89□□□□□ -2.11
YBX1P67809 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.89□□□□□ -2.11
YBX1P67809 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
YBX1P67809 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
YBX1P67809 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
YBX1P67809 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
YBX1P67809 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
YBX1P67809 Y_RNA.168-201ENST00000363740 102 ntBASIC1.88□□□□□ -2.11
YBX1P67809 Y_RNA.221-201ENST00000364248 96 ntBASIC1.88□□□□□ -2.11
YBX1P67809 RNU6-949P-201ENST00000384040 107 ntBASIC1.88□□□□□ -2.11
YBX1P67809 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
YBX1P67809 MIR489-201ENST00000384923 84 ntBASIC1.88□□□□□ -2.11
YBX1P67809 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
YBX1P67809 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.88□□□□□ -2.11
YBX1P67809 RNU6-613P-201ENST00000410412 108 ntBASIC1.88□□□□□ -2.11
YBX1P67809 snoU13.2-201ENST00000459201 104 ntBASIC1.88□□□□□ -2.11
YBX1P67809 AC020891.4-201ENST00000605745 93 ntBASIC1.88□□□□□ -2.11
YBX1P67809 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
YBX1P67809 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
YBX1P67809 AL596028.1-201ENST00000326971 197 ntBASIC1.87□□□□□ -2.11
YBX1P67809 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
YBX1P67809 SNORD115-27-201ENST00000364430 82 ntBASIC1.87□□□□□ -2.11
YBX1P67809 RNY1P2-201ENST00000364820 117 ntBASIC1.87□□□□□ -2.11
YBX1P67809 SNORA25.9-201ENST00000365087 128 ntBASIC1.87□□□□□ -2.11
YBX1P67809 RNU6-24P-201ENST00000384440 107 ntBASIC1.87□□□□□ -2.11
YBX1P67809 Y_RNA.607-201ENST00000410597 98 ntBASIC1.87□□□□□ -2.11
YBX1P67809 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
YBX1P67809 snoU13.18-201ENST00000459483 104 ntBASIC1.87□□□□□ -2.11
YBX1P67809 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
YBX1P67809 MIR4500-201ENST00000579472 76 ntBASIC1.87□□□□□ -2.11
YBX1P67809 AC090897.1-201ENST00000580909 226 ntBASIC1.87□□□□□ -2.11
YBX1P67809 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.87□□□□□ -2.11
YBX1P67809 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
YBX1P67809 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
YBX1P67809 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
YBX1P67809 RNU6-396P-201ENST00000365369 105 ntBASIC1.86□□□□□ -2.11
YBX1P67809 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
YBX1P67809 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
YBX1P67809 AL357312.1-201ENST00000603879 298 ntBASIC1.86□□□□□ -2.11
YBX1P67809 AP000753.3-201ENST00000604083 169 ntBASIC1.86□□□□□ -2.11
YBX1P67809 AL096861.1-201ENST00000610899 123 ntBASIC1.86□□□□□ -2.11
YBX1P67809 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.86□□□□□ -2.11
YBX1P67809 MIR8070-201ENST00000616510 88 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 300 ms