Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SNORA40.9-201ENST00000515895 93 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 RNU6-470P-201ENST00000515954 104 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 SCARNA24.1-201ENST00000516465 137 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 RNU6-1174P-201ENST00000517278 101 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 AP003181.2-201ENST00000528941 181 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 RNU6-495P-201ENST00000362995 107 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 Y_RNA.127-201ENST00000363386 109 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 SNORD27-201ENST00000363981 72 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 RNU6-20P-201ENST00000384106 107 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 MTND4LP7-201ENST00000431728 294 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 MTCO2P30-201ENST00000503662 364 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 MIR5696-201ENST00000578474 85 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 ZNF92P2-201ENST00000600543 1059 ntBASIC-4.1□□□□□ -3.07
CLTCL1P53675 Y_RNA.101-201ENST00000363154 102 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 RNU6-957P-201ENST00000363652 99 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 Y_RNA.419-201ENST00000384041 102 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 AL160004.2-201ENST00000432935 350 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 HSPE1P25-201ENST00000455484 251 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 AC097484.2-201ENST00000509147 251 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 AL138825.1-201ENST00000618587 192 ntBASIC-4.11□□□□□ -3.07
CLTCL1P53675 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.12□□□□□ -3.07
CLTCL1P53675 CYCSP46-201ENST00000423569 204 ntBASIC-4.12□□□□□ -3.07
CLTCL1P53675 Y_RNA.519-201ENST00000384553 102 ntBASIC-4.13□□□□□ -3.07
CLTCL1P53675 MIR4662B-201ENST00000579498 81 ntBASIC-4.13□□□□□ -3.07
CLTCL1P53675 AC104010.1-201ENST00000616889 150 ntBASIC-4.13□□□□□ -3.07
CLTCL1P53675 RNU6-990P-201ENST00000364385 104 ntBASIC-4.13□□□□□ -3.07
CLTCL1P53675 Y_RNA.721-201ENST00000517207 102 ntBASIC-4.13□□□□□ -3.07
CLTCL1P53675 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-4.13□□□□□ -3.07
CLTCL1P53675 RNU6-433P-201ENST00000363216 104 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 RNU6-690P-201ENST00000365242 106 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 RNU6-1283P-201ENST00000365314 105 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 MIR206-201ENST00000384872 86 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 MIR4703-201ENST00000577728 79 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 AL021707.8-201ENST00000609428 183 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.14□□□□□ -3.07
CLTCL1P53675 Y_RNA.405-201ENST00000383979 100 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 Y_RNA.451-201ENST00000384200 100 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 Y_RNA.524-201ENST00000384564 100 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 Y_RNA.561-201ENST00000384694 100 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 RNU6-1220P-201ENST00000517126 108 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 AC009779.6-201ENST00000603972 165 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-4.15□□□□□ -3.07
CLTCL1P53675 Y_RNA.448-201ENST00000384185 108 ntBASIC-4.16□□□□□ -3.08
CLTCL1P53675 AL606923.1-201ENST00000406616 190 ntBASIC-4.16□□□□□ -3.08
CLTCL1P53675 AC097639.2-201ENST00000603159 172 ntBASIC-4.16□□□□□ -3.08
CLTCL1P53675 Y_RNA.3-201ENST00000362331 103 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 RNU6-235P-201ENST00000362644 107 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 RNU6-630P-201ENST00000391258 106 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 RNU6-408P-201ENST00000515910 100 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 MIR4724-201ENST00000579485 89 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 AC087741.2-201ENST00000619415 172 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 RNU6-801P-201ENST00000364087 105 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 RNU7-70P-201ENST00000516941 66 ntBASIC-4.17□□□□□ -3.08
CLTCL1P53675 Y_RNA.66-201ENST00000362862 102 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 SNORA33.1-201ENST00000364957 130 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 MIR451A-201ENST00000385059 72 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 RNU6-126P-201ENST00000516685 103 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 MTATP6P15-201ENST00000527233 835 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 AP002392.1-201ENST00000537692 208 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 AC060780.3-201ENST00000589464 80 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-4.18□□□□□ -3.08
CLTCL1P53675 Y_RNA.344-201ENST00000365381 112 ntBASIC-4.19□□□□□ -3.08
CLTCL1P53675 Y_RNA.463-201ENST00000384271 102 ntBASIC-4.19□□□□□ -3.08
CLTCL1P53675 RNU6-935P-201ENST00000410371 100 ntBASIC-4.19□□□□□ -3.08
CLTCL1P53675 UBE2V1P7-201ENST00000446395 340 ntBASIC-4.19□□□□□ -3.08
CLTCL1P53675 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-4.19□□□□□ -3.08
CLTCL1P53675 Y_RNA.8-201ENST00000362353 102 ntBASIC-4.2□□□□□ -3.08
CLTCL1P53675 Y_RNA.367-201ENST00000365544 101 ntBASIC-4.2□□□□□ -3.08
CLTCL1P53675 Y_RNA.441-201ENST00000384123 112 ntBASIC-4.2□□□□□ -3.08
CLTCL1P53675 RNU6-246P-201ENST00000384702 107 ntBASIC-4.2□□□□□ -3.08
CLTCL1P53675 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-4.2□□□□□ -3.08
CLTCL1P53675 Y_RNA.105-201ENST00000363182 111 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 RNU6-790P-201ENST00000384479 105 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 MIR1-2-201ENST00000384961 85 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 RNU6-132P-201ENST00000383863 107 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 SNORD77.4-201ENST00000516158 81 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 RNU6-861P-201ENST00000516745 106 ntBASIC-4.21□□□□□ -3.08
CLTCL1P53675 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-4.21□□□□□ -3.08
CLTCL1P53675 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-4.21□□□□□ -3.08
CLTCL1P53675 Y_RNA.106-201ENST00000363189 100 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 RNU6-879P-201ENST00000364328 108 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 RNU6-214P-201ENST00000384130 107 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 RNU6-207P-201ENST00000384137 107 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 SNORA72.4-201ENST00000384174 132 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-4.22□□□□□ -3.09
CLTCL1P53675 Y_RNA.706-201ENST00000516933 99 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-4.22□□□□□ -3.09
CLTCL1P53675 AC012531.4-201ENST00000616509 177 ntBASIC-4.22□□□□□ -3.09
CLTCL1P53675 Y_RNA.618-201ENST00000410949 107 ntBASIC-4.23□□□□□ -3.09
CLTCL1P53675 RNU6-1102P-201ENST00000516149 96 ntBASIC-4.23□□□□□ -3.09
CLTCL1P53675 Y_RNA.59-201ENST00000362828 102 ntBASIC-4.24□□□□□ -3.09
CLTCL1P53675 AC016550.1-201ENST00000505348 785 ntBASIC-4.24□□□□□ -3.09
CLTCL1P53675 SNORA40.2-201ENST00000390847 128 ntBASIC-4.24□□□□□ -3.09
CLTCL1P53675 RNU7-141P-201ENST00000459304 62 ntBASIC-4.24□□□□□ -3.09
CLTCL1P53675 AC084782.3-201ENST00000612282 578 ntBASIC-4.24□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms