Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 Y_RNA.188-201ENST00000363952 111 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 Y_RNA.297-201ENST00000364950 91 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 RNU6-716P-201ENST00000365621 103 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 Y_RNA.470-201ENST00000384307 117 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 RNU7-113P-201ENST00000459273 62 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 RNU7-35P-201ENST00000517174 62 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 AC133485.4-201ENST00000561835 220 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 AC072026.1-201ENST00000605023 201 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 AC141273.2-201ENST00000618989 130 ntBASIC0.33□□□□□ -2.36
PTPN4P29074 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.33□□□□□ -2.36
PTPN4P29074 SNORD115-2-201ENST00000362842 82 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 RNU6-1099P-201ENST00000363533 107 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 RNU6-379P-201ENST00000363813 104 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 SNORD115-20-201ENST00000365099 82 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 Y_RNA.497-201ENST00000384447 98 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 RNU6-239P-201ENST00000390990 99 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 AL022718.1-201ENST00000412004 84 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 RNU7-79P-201ENST00000516082 62 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 RNU6-1271P-201ENST00000517049 105 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 MIR3646-201ENST00000578301 84 ntBASIC0.32□□□□□ -2.36
PTPN4P29074 Y_RNA.120-201ENST00000363304 110 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU4-84P-201ENST00000364200 139 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU6-690P-201ENST00000365242 106 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 SNORA72.6-201ENST00000384520 129 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 MIR1197-201ENST00000408818 88 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU6-588P-201ENST00000410281 105 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 SNORA40.8-201ENST00000411034 126 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 Y_RNA.793-201ENST00000411222 111 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 SNORA25.12-201ENST00000516202 82 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU7-121P-201ENST00000516604 62 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 RNU2-60P-201ENST00000517290 128 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 AC011603.4-201ENST00000611325 277 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 AL109933.3-201ENST00000619095 188 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 MIR6844-201ENST00000637122 62 ntBASIC0.31□□□□□ -2.36
PTPN4P29074 Y_RNA.32-201ENST00000362589 110 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 Y_RNA.251-201ENST00000364551 99 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 Y_RNA.357-201ENST00000365487 109 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 Y_RNA.401-201ENST00000383965 117 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 SNORA8.2-201ENST00000384372 139 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 Y_RNA.567-201ENST00000384736 106 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 MIR644A-201ENST00000385262 94 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 MT-TG-201ENST00000387429 68 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 AL512326.2-201ENST00000426359 151 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 RNA5SP33-201ENST00000516687 98 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 SNORA25.16-201ENST00000516741 121 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 AC078938.1-201ENST00000620993 318 ntBASIC0.3□□□□□ -2.36
PTPN4P29074 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 Y_RNA.240-201ENST00000364469 95 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 Y_RNA.374-201ENST00000365606 101 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 MTATP6P21-201ENST00000440681 189 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 RNU2-35P-201ENST00000516446 142 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 AP002392.1-201ENST00000537692 208 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.29□□□□□ -2.36
PTPN4P29074 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 MIR4305-201ENST00000583252 102 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 MIR3658-201ENST00000636291 56 ntBASIC0.29□□□□□ -2.36
PTPN4P29074 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 RNY1P11-201ENST00000363759 113 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 Y_RNA.174-201ENST00000363781 105 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 SNORA32-201ENST00000384072 121 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 Y_RNA.531-201ENST00000384589 121 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 Y_RNA.536-201ENST00000384621 113 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 Y_RNA.552-201ENST00000384665 112 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 RNU6-240P-201ENST00000516098 97 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 RNU6-469P-201ENST00000516253 101 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 MTND5P34-201ENST00000568888 325 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 MIR548AE2-201ENST00000583456 67 ntBASIC0.28□□□□□ -2.36
PTPN4P29074 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-200P-201ENST00000364743 107 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-1318P-201ENST00000365389 103 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
PTPN4P29074 RNU7-120P-201ENST00000459334 63 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-138P-201ENST00000515952 107 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-135P-201ENST00000516769 101 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 Y_RNA.697-201ENST00000516776 113 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-388P-201ENST00000517012 105 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 RNU6-389P-201ENST00000517048 105 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 AC138907.4-201ENST00000570107 226 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 DNAJC19P2-201ENST00000593340 302 ntBASIC0.27□□□□□ -2.37
PTPN4P29074 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 RNU6-535P-201ENST00000384722 107 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 Y_RNA.651-201ENST00000459380 103 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 RNU6-861P-201ENST00000516745 106 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 RNU7-137P-201ENST00000516788 62 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
PTPN4P29074 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
PTPN4P29074 RNA5SP257-201ENST00000363023 116 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms