Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.588-201ENST00000391254 102 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 RNU7-79P-201ENST00000516082 62 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 RNU6-182P-201ENST00000516970 105 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 uc_338.16-201ENST00000621804 95 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 MIR3658-201ENST00000636291 56 ntBASIC0.57□□□□□ -2.32
ABCD3P28288 Y_RNA.205-201ENST00000364128 113 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 RNU2-60P-201ENST00000517290 128 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 MIR4491-201ENST00000581087 68 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 AC021443.1-201ENST00000604478 211 ntBASIC0.56□□□□□ -2.32
ABCD3P28288 Y_RNA.13-201ENST00000362403 112 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 Y_RNA.470-201ENST00000384307 117 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 Y_RNA.531-201ENST00000384589 121 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 AL603914.1-201ENST00000401964 204 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 RNU6-240P-201ENST00000516098 97 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 AC112693.2-201ENST00000556538 232 ntBASIC0.55□□□□□ -2.32
ABCD3P28288 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
ABCD3P28288 SNORA72.6-201ENST00000384520 129 ntBASIC0.54□□□□□ -2.32
ABCD3P28288 AC096949.1-201ENST00000412047 152 ntBASIC0.54□□□□□ -2.32
ABCD3P28288 RNU6-469P-201ENST00000516253 101 ntBASIC0.54□□□□□ -2.32
ABCD3P28288 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
ABCD3P28288 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
ABCD3P28288 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ABCD3P28288 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
ABCD3P28288 Y_RNA.174-201ENST00000363781 105 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 Y_RNA.251-201ENST00000364551 99 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 Y_RNA.299-201ENST00000364973 94 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 RNU6-1194P-201ENST00000516208 104 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 Y_RNA.690-201ENST00000516603 95 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
ABCD3P28288 SNORD114-23-201ENST00000363536 72 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 AL512326.2-201ENST00000426359 151 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 RNU7-164P-201ENST00000459221 62 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 RNU2-35P-201ENST00000516446 142 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
ABCD3P28288 RNU4-11P-201ENST00000365287 132 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 RNU6-449P-201ENST00000383914 107 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 RNU6-679P-201ENST00000391003 106 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 Y_RNA.580-201ENST00000391004 95 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 MIR3678-201ENST00000578455 94 ntBASIC0.51□□□□□ -2.33
ABCD3P28288 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 SNORA32-201ENST00000384072 121 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 Y_RNA.617-201ENST00000410920 90 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 Y_RNA.651-201ENST00000459380 103 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 MIR548AE2-201ENST00000583456 67 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 AC098479.1-201ENST00000609225 154 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 Y_RNA.778-201ENST00000620203 90 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 AC010487.4-201ENST00000637027 61 ntBASIC0.5□□□□□ -2.33
ABCD3P28288 SNORD114-10-201ENST00000363409 72 ntBASIC0.49□□□□□ -2.33
ABCD3P28288 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
ABCD3P28288 Y_RNA.697-201ENST00000516776 113 ntBASIC0.49□□□□□ -2.33
ABCD3P28288 RNU4-58P-201ENST00000363192 141 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 RNU6-151P-201ENST00000364158 107 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 Y_RNA.298-201ENST00000364960 107 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 AC074198.2-201ENST00000508153 258 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 RNU7-123P-201ENST00000515911 60 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 DEFB131E-201ENST00000532329 154 ntBASIC0.48□□□□□ -2.33
ABCD3P28288 RNU6-309P-201ENST00000364573 106 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 MIR513C-201ENST00000401352 84 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 RNU4-69P-201ENST00000410677 143 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 SNORA25.12-201ENST00000516202 82 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 Y_RNA.686-201ENST00000516548 134 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 SNORA25.16-201ENST00000516741 121 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 RNU7-137P-201ENST00000516788 62 ntBASIC0.47□□□□□ -2.33
ABCD3P28288 RNA5SP133-201ENST00000363368 119 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 RNY1P11-201ENST00000363759 113 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 SNORD77B-201ENST00000391112 67 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 RNU6-394P-201ENST00000410735 107 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 SNORD67.1-201ENST00000516618 108 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 MIR924-201ENST00000638017 53 ntBASIC0.46□□□□□ -2.34
ABCD3P28288 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
ABCD3P28288 Y_RNA.270-201ENST00000364693 104 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 Y_RNA.366-201ENST00000365540 102 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 SNORD116-18-201ENST00000383961 92 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 RNU6-535P-201ENST00000384722 107 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 RNU7-197P-201ENST00000458836 62 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
ABCD3P28288 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms