Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 Y_RNA.539-201ENST00000384635 107 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 AL118496.2-201ENST00000448300 230 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 RNU7-113P-201ENST00000459273 62 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 RNU6-1023P-201ENST00000516137 106 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 AL627230.5-201ENST00000619807 58 ntBASIC0.28□□□□□ -2.36
CAPN3P20807 RNY1P13-201ENST00000365030 105 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 Y_RNA.435-201ENST00000384095 112 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 Y_RNA.536-201ENST00000384621 113 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 Y_RNA.549-201ENST00000384657 102 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 Y_RNA.617-201ENST00000410920 90 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 MTATP6P21-201ENST00000440681 189 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 AC107027.2-201ENST00000512197 115 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 RNU6-1194P-201ENST00000516208 104 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 DEFB131E-201ENST00000532329 154 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 AC067863.3-201ENST00000624172 122 ntBASIC0.27□□□□□ -2.37
CAPN3P20807 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
CAPN3P20807 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 RNU6-702P-201ENST00000364982 107 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 RNU2-59P-201ENST00000410482 191 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 MIR3128-201ENST00000581957 66 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 AC011603.4-201ENST00000611325 277 ntBASIC0.26□□□□□ -2.37
CAPN3P20807 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 RNU6-535P-201ENST00000384722 107 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 MIR644A-201ENST00000385262 94 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 MIR1912-201ENST00000410389 80 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 RNU7-79P-201ENST00000516082 62 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 RNA5SP268-201ENST00000516828 124 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 U6.106-201ENST00000636360 105 ntBASIC0.25□□□□□ -2.37
CAPN3P20807 Y_RNA.52-201ENST00000362760 96 ntBASIC0.24□□□□□ -2.37
CAPN3P20807 RNU4-58P-201ENST00000363192 141 ntBASIC0.24□□□□□ -2.37
CAPN3P20807 Y_RNA.193-201ENST00000363979 102 ntBASIC0.24□□□□□ -2.37
CAPN3P20807 Y_RNA.200-201ENST00000364018 102 ntBASIC0.24□□□□□ -2.37
CAPN3P20807 Y_RNA.337-201ENST00000365312 102 ntBASIC0.24□□□□□ -2.37
CAPN3P20807 Y_RNA.60-201ENST00000362831 98 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 Y_RNA.83-201ENST00000363005 113 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU6-1020P-201ENST00000363684 107 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU6-312P-201ENST00000364629 107 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU6-818P-201ENST00000364837 108 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU6-690P-201ENST00000365242 106 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNA5SP33-201ENST00000516687 98 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 SNORA31.14-201ENST00000516728 116 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 RNU7-35P-201ENST00000517174 62 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 MIR4639-201ENST00000584938 69 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
CAPN3P20807 Y_RNA.32-201ENST00000362589 110 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 RNU6-196P-201ENST00000384315 107 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIRLET7F2-201ENST00000385277 83 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 SCARNA16.5-201ENST00000517114 183 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 AC112693.2-201ENST00000556538 232 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIR5589-201ENST00000579442 60 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIR4305-201ENST00000583252 102 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 AC091304.10-201ENST00000641554 121 ntBASIC0.22□□□□□ -2.37
CAPN3P20807 MIR411-201ENST00000362239 96 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 SNORD115-2-201ENST00000362842 82 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 Y_RNA.171-201ENST00000363760 102 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 SNORD115-20-201ENST00000365099 82 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR568-201ENST00000385036 95 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 SNORA75.5-201ENST00000391291 81 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR4636-201ENST00000582271 80 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR4719-201ENST00000585233 84 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
CAPN3P20807 MIR101-2-201ENST00000362195 79 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 SNORA36.1-201ENST00000363424 132 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 snoU13.19-201ENST00000459148 104 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 SNORA25.16-201ENST00000516741 121 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 RNU6-111P-201ENST00000517179 105 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 AC098479.1-201ENST00000609225 154 ntBASIC0.2□□□□□ -2.38
CAPN3P20807 RNU6-918P-201ENST00000391219 106 ntBASIC0.19□□□□□ -2.38
CAPN3P20807 AC096949.1-201ENST00000412047 152 ntBASIC0.19□□□□□ -2.38
CAPN3P20807 MTND3P2-201ENST00000438452 342 ntBASIC0.19□□□□□ -2.38
CAPN3P20807 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
CAPN3P20807 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
CAPN3P20807 Y_RNA.357-201ENST00000365487 109 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 SNORD18B-201ENST00000365659 72 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 Y_RNA.447-201ENST00000384184 113 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 Z95118.1-201ENST00000421372 247 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 RNU6-1258P-201ENST00000516911 111 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 MIR3646-201ENST00000578301 84 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 MIR6844-201ENST00000637122 62 ntBASIC0.18□□□□□ -2.38
CAPN3P20807 RNA5SP98-201ENST00000363158 137 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 RNA5SP133-201ENST00000363368 119 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 Y_RNA.452-201ENST00000384202 108 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 RNU6-768P-201ENST00000384683 107 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 RNA5SP236-201ENST00000516169 116 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 SCARNA15.1-201ENST00000516384 125 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
CAPN3P20807 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 294.2 ms