Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC006504.6-201ENST00000590142 199 ntBASIC-1.6□□□□□ -2.67
CXCL1P09341 AC006006.1-201ENST00000603082 144 ntBASIC-1.6□□□□□ -2.67
CXCL1P09341 MIR6854-201ENST00000614935 69 ntBASIC-1.6□□□□□ -2.67
CXCL1P09341 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 SNORA51.5-201ENST00000384126 131 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 AC096644.2-201ENST00000429278 159 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 RNU7-48P-201ENST00000458875 63 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 RNU6-507P-201ENST00000516045 100 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 MIR548AE2-201ENST00000583456 67 ntBASIC-1.61□□□□□ -2.67
CXCL1P09341 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.61□□□□□ -2.67
CXCL1P09341 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 SNORD115-35-201ENST00000365122 82 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 RNU6-431P-201ENST00000383874 107 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 RNU6-890P-201ENST00000384121 107 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 RNY1P6-201ENST00000384193 109 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 RNU6-310P-201ENST00000384655 107 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 SNORD64-201ENST00000386683 67 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.62□□□□□ -2.67
CXCL1P09341 RNA5SP476-201ENST00000516613 103 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.62□□□□□ -2.67
CXCL1P09341 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.62□□□□□ -2.67
CXCL1P09341 RNU6-571P-201ENST00000384128 107 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 AL731563.1-201ENST00000442202 214 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 U8.20-201ENST00000459445 131 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 RNU7-106P-201ENST00000459514 67 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 RNU6-287P-201ENST00000516230 98 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 RNU6-358P-201ENST00000516564 75 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 MIR5704-201ENST00000584029 77 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 AP001362.1-201ENST00000625165 124 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 MIR4272-201ENST00000635924 64 ntBASIC-1.63□□□□□ -2.67
CXCL1P09341 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 MIR181A1-201ENST00000385026 110 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.64□□□□□ -2.67
CXCL1P09341 MIR4320-201ENST00000636981 65 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 MIR382-201ENST00000637119 76 ntBASIC-1.64□□□□□ -2.67
CXCL1P09341 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 RNU4-32P-201ENST00000363404 141 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 RNU4-10P-201ENST00000364383 140 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 RNU6-506P-201ENST00000516553 94 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 RPS29P30-201ENST00000600975 111 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 AC048344.4-201ENST00000619744 527 ntBASIC-1.65□□□□□ -2.67
CXCL1P09341 MIR409-201ENST00000362237 79 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 RNU6-476P-201ENST00000384726 107 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 RNU6-314P-201ENST00000516574 104 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 RNU6-706P-201ENST00000517229 104 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 MIR5690-201ENST00000583739 73 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 U4.1-201ENST00000620349 87 ntBASIC-1.66□□□□□ -2.68
CXCL1P09341 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 SNORD57-201ENST00000448188 72 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 MTND4LP30-201ENST00000454092 297 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 RNU6-415P-201ENST00000516252 97 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 PART1_1.1-201ENST00000611761 217 ntBASIC-1.67□□□□□ -2.68
CXCL1P09341 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 MIR559-201ENST00000385188 96 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 SERF1AP1-201ENST00000514575 187 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.68□□□□□ -2.68
CXCL1P09341 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 MIR206-201ENST00000384872 86 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 HSPE1P25-201ENST00000455484 251 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 MIR1270-201ENST00000459320 83 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 AL138825.1-201ENST00000618587 192 ntBASIC-1.69□□□□□ -2.68
CXCL1P09341 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 RNU6-472P-201ENST00000384299 107 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 MIR216B-201ENST00000390186 82 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 RNU2-16P-201ENST00000410712 136 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 RNU4-14P-201ENST00000410858 122 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 RNU6-370P-201ENST00000411008 104 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 AL353813.1-201ENST00000440700 253 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 MIR8068-201ENST00000618032 68 ntBASIC-1.7□□□□□ -2.68
CXCL1P09341 SNORD113-8-201ENST00000363497 74 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 AC082651.2-201ENST00000496833 166 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 SNORA40.14-201ENST00000516543 86 ntBASIC-1.71□□□□□ -2.68
CXCL1P09341 snoU83B.1-201ENST00000517136 88 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 974.2 ms