Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-349P-201ENST00000362402 107 ntBASIC0.51□□□□□ -2.33
DDX58O95786 RNU6-239P-201ENST00000390990 99 ntBASIC0.51□□□□□ -2.33
DDX58O95786 Y_RNA.617-201ENST00000410920 90 ntBASIC0.51□□□□□ -2.33
DDX58O95786 RNU7-79P-201ENST00000516082 62 ntBASIC0.51□□□□□ -2.33
DDX58O95786 SNORA25.12-201ENST00000516202 82 ntBASIC0.51□□□□□ -2.33
DDX58O95786 RNU6-469P-201ENST00000516253 101 ntBASIC0.51□□□□□ -2.33
DDX58O95786 MIR4491-201ENST00000581087 68 ntBASIC0.51□□□□□ -2.33
DDX58O95786 MIR6082-201ENST00000613604 109 ntBASIC0.51□□□□□ -2.33
DDX58O95786 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
DDX58O95786 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
DDX58O95786 RNY1P13-201ENST00000365030 105 ntBASIC0.5□□□□□ -2.33
DDX58O95786 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
DDX58O95786 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
DDX58O95786 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
DDX58O95786 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
DDX58O95786 uc_338.16-201ENST00000621804 95 ntBASIC0.5□□□□□ -2.33
DDX58O95786 Y_RNA.42-201ENST00000362660 108 ntBASIC0.49□□□□□ -2.33
DDX58O95786 SNORA32-201ENST00000384072 121 ntBASIC0.49□□□□□ -2.33
DDX58O95786 DEFB131E-201ENST00000532329 154 ntBASIC0.49□□□□□ -2.33
DDX58O95786 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
DDX58O95786 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
DDX58O95786 Y_RNA.470-201ENST00000384307 117 ntBASIC0.48□□□□□ -2.33
DDX58O95786 Y_RNA.497-201ENST00000384447 98 ntBASIC0.48□□□□□ -2.33
DDX58O95786 Y_RNA.588-201ENST00000391254 102 ntBASIC0.48□□□□□ -2.33
DDX58O95786 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.48□□□□□ -2.33
DDX58O95786 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.33
DDX58O95786 RNA5SP236-201ENST00000516169 116 ntBASIC0.48□□□□□ -2.33
DDX58O95786 AC133485.4-201ENST00000561835 220 ntBASIC0.48□□□□□ -2.33
DDX58O95786 AC138907.4-201ENST00000570107 226 ntBASIC0.48□□□□□ -2.33
DDX58O95786 MIR3646-201ENST00000578301 84 ntBASIC0.48□□□□□ -2.33
DDX58O95786 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.48□□□□□ -2.33
DDX58O95786 RNU4-84P-201ENST00000364200 139 ntBASIC0.47□□□□□ -2.33
DDX58O95786 RNU6-200P-201ENST00000364743 107 ntBASIC0.47□□□□□ -2.33
DDX58O95786 AL512326.2-201ENST00000426359 151 ntBASIC0.47□□□□□ -2.33
DDX58O95786 Y_RNA.662-201ENST00000516028 97 ntBASIC0.47□□□□□ -2.33
DDX58O95786 RNU6-240P-201ENST00000516098 97 ntBASIC0.47□□□□□ -2.33
DDX58O95786 RNA5SP94-201ENST00000516917 108 ntBASIC0.47□□□□□ -2.33
DDX58O95786 MIR4305-201ENST00000583252 102 ntBASIC0.47□□□□□ -2.33
DDX58O95786 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
DDX58O95786 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
DDX58O95786 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
DDX58O95786 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
DDX58O95786 MT-TG-201ENST00000387429 68 ntBASIC0.46□□□□□ -2.34
DDX58O95786 Y_RNA.584-201ENST00000391090 114 ntBASIC0.46□□□□□ -2.34
DDX58O95786 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
DDX58O95786 RNU6-138P-201ENST00000515952 107 ntBASIC0.46□□□□□ -2.34
DDX58O95786 RNU6-861P-201ENST00000516745 106 ntBASIC0.46□□□□□ -2.34
DDX58O95786 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
DDX58O95786 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.46□□□□□ -2.34
DDX58O95786 DNAJC19P2-201ENST00000593340 302 ntBASIC0.46□□□□□ -2.34
DDX58O95786 AC021443.1-201ENST00000604478 211 ntBASIC0.46□□□□□ -2.34
DDX58O95786 AC011603.4-201ENST00000611325 277 ntBASIC0.46□□□□□ -2.34
DDX58O95786 MIR3658-201ENST00000636291 56 ntBASIC0.46□□□□□ -2.34
DDX58O95786 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
DDX58O95786 Y_RNA.120-201ENST00000363304 110 ntBASIC0.45□□□□□ -2.34
DDX58O95786 RNU6-1318P-201ENST00000365389 103 ntBASIC0.45□□□□□ -2.34
DDX58O95786 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
DDX58O95786 RNU5E-3P-201ENST00000515913 68 ntBASIC0.45□□□□□ -2.34
DDX58O95786 SNORA25.16-201ENST00000516741 121 ntBASIC0.45□□□□□ -2.34
DDX58O95786 Y_RNA.697-201ENST00000516776 113 ntBASIC0.45□□□□□ -2.34
DDX58O95786 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.45□□□□□ -2.34
DDX58O95786 Y_RNA.29-201ENST00000362570 113 ntBASIC0.44□□□□□ -2.34
DDX58O95786 Y_RNA.531-201ENST00000384589 121 ntBASIC0.44□□□□□ -2.34
DDX58O95786 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
DDX58O95786 RNU6-765P-201ENST00000516916 99 ntBASIC0.44□□□□□ -2.34
DDX58O95786 RNU7-35P-201ENST00000517174 62 ntBASIC0.44□□□□□ -2.34
DDX58O95786 Y_RNA.240-201ENST00000364469 95 ntBASIC0.43□□□□□ -2.34
DDX58O95786 RNU6-535P-201ENST00000384722 107 ntBASIC0.43□□□□□ -2.34
DDX58O95786 snosnR66.1-201ENST00000391095 99 ntBASIC0.43□□□□□ -2.34
DDX58O95786 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
DDX58O95786 RNU7-164P-201ENST00000459221 62 ntBASIC0.43□□□□□ -2.34
DDX58O95786 SNORD115-2-201ENST00000362842 82 ntBASIC0.42□□□□□ -2.34
DDX58O95786 SNORD115-20-201ENST00000365099 82 ntBASIC0.42□□□□□ -2.34
DDX58O95786 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
DDX58O95786 AC096949.1-201ENST00000412047 152 ntBASIC0.42□□□□□ -2.34
DDX58O95786 RNU6-1194P-201ENST00000516208 104 ntBASIC0.42□□□□□ -2.34
DDX58O95786 RNU2-35P-201ENST00000516446 142 ntBASIC0.42□□□□□ -2.34
DDX58O95786 RNU7-121P-201ENST00000516604 62 ntBASIC0.42□□□□□ -2.34
DDX58O95786 MTND5P34-201ENST00000568888 325 ntBASIC0.42□□□□□ -2.34
DDX58O95786 MIR548AE2-201ENST00000583456 67 ntBASIC0.42□□□□□ -2.34
DDX58O95786 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
DDX58O95786 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.42□□□□□ -2.34
DDX58O95786 Y_RNA.174-201ENST00000363781 105 ntBASIC0.41□□□□□ -2.34
DDX58O95786 Y_RNA.536-201ENST00000384621 113 ntBASIC0.41□□□□□ -2.34
DDX58O95786 RNU7-120P-201ENST00000459334 63 ntBASIC0.41□□□□□ -2.34
DDX58O95786 Y_RNA.690-201ENST00000516603 95 ntBASIC0.41□□□□□ -2.34
DDX58O95786 SNORA31.14-201ENST00000516728 116 ntBASIC0.41□□□□□ -2.34
DDX58O95786 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
DDX58O95786 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
DDX58O95786 Y_RNA.32-201ENST00000362589 110 ntBASIC0.4□□□□□ -2.35
DDX58O95786 RNU4-58P-201ENST00000363192 141 ntBASIC0.4□□□□□ -2.35
DDX58O95786 RNA5SP133-201ENST00000363368 119 ntBASIC0.4□□□□□ -2.35
DDX58O95786 Y_RNA.251-201ENST00000364551 99 ntBASIC0.4□□□□□ -2.35
DDX58O95786 RNU6-531P-201ENST00000516694 104 ntBASIC0.4□□□□□ -2.35
DDX58O95786 SNORA81.3-201ENST00000517283 198 ntBASIC0.4□□□□□ -2.35
DDX58O95786 RNU2-60P-201ENST00000517290 128 ntBASIC0.4□□□□□ -2.35
DDX58O95786 U6.109-201ENST00000636749 87 ntBASIC0.4□□□□□ -2.35
DDX58O95786 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
DDX58O95786 RNU6-1229P-201ENST00000364295 107 ntBASIC0.39□□□□□ -2.35
DDX58O95786 RNU6-309P-201ENST00000364573 106 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms