Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
NPHS1O60500 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
NPHS1O60500 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
NPHS1O60500 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.7□□□□□ -2.14
NPHS1O60500 AC133485.1-201ENST00000567176 124 ntBASIC1.7□□□□□ -2.14
NPHS1O60500 SNORA4-201ENST00000584302 138 ntBASIC1.7□□□□□ -2.14
NPHS1O60500 SNORD73B-201ENST00000364394 72 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 RNU6-1163P-201ENST00000364516 107 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 MIR1261-201ENST00000408659 82 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 BTF3P4-201ENST00000418852 495 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 AC048334.1-201ENST00000477975 159 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 RNA5SP182-201ENST00000516064 82 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 MIR3945-201ENST00000581853 98 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 SEPT14P17-201ENST00000617978 177 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 AP001362.1-201ENST00000625165 124 ntBASIC1.69□□□□□ -2.14
NPHS1O60500 MIR377-201ENST00000362145 69 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 U8.15-201ENST00000390947 134 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 RNU6-86P-201ENST00000606534 107 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
NPHS1O60500 Y_RNA.168-201ENST00000363740 102 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 RNU6-580P-201ENST00000365159 107 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 Y_RNA.558-201ENST00000384685 113 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 MIR548G-201ENST00000408442 89 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 Y_RNA.705-201ENST00000516862 110 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 MIR4439-201ENST00000583746 80 ntBASIC1.67□□□□□ -2.14
NPHS1O60500 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NPHS1O60500 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHS1O60500 RNY1P2-201ENST00000364820 117 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 RNU6-813P-201ENST00000384691 107 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHS1O60500 SPINT5P-201ENST00000448174 155 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 RNU6-762P-201ENST00000517107 102 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 AC026421.1-201ENST00000519101 163 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 AC138749.4-201ENST00000563970 127 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 RNU6-90P-201ENST00000606352 106 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 MIR6715A-201ENST00000615929 79 ntBASIC1.66□□□□□ -2.14
NPHS1O60500 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
NPHS1O60500 SNORD114-1-201ENST00000362705 72 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 RNU6-887P-201ENST00000410660 100 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 SNORA31.2-201ENST00000516019 134 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 SNORA72.7-201ENST00000516349 94 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 AC104984.5-201ENST00000586878 94 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
NPHS1O60500 U6.109-201ENST00000636749 87 ntBASIC1.65□□□□□ -2.15
NPHS1O60500 Y_RNA.96-201ENST00000363092 109 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 Y_RNA.363-201ENST00000365529 113 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 SNORD38.2-201ENST00000384470 69 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 Y_RNA.567-201ENST00000384736 106 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 MT-TF-201ENST00000387314 71 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
NPHS1O60500 SNORA75.2-201ENST00000391138 150 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 SNORA75.3-201ENST00000391231 150 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 MTND5P40-201ENST00000559945 246 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 AC090897.1-201ENST00000580909 226 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 AC103810.7-201ENST00000607821 91 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 AC012676.2-201ENST00000619258 186 ntBASIC1.64□□□□□ -2.15
NPHS1O60500 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
NPHS1O60500 RNA5SP133-201ENST00000363368 119 ntBASIC1.63□□□□□ -2.15
NPHS1O60500 Y_RNA.190-201ENST00000363964 101 ntBASIC1.63□□□□□ -2.15
NPHS1O60500 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
NPHS1O60500 RNU6-972P-201ENST00000391208 107 ntBASIC1.63□□□□□ -2.15
NPHS1O60500 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
NPHS1O60500 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.63□□□□□ -2.15
NPHS1O60500 Y_RNA.173-201ENST00000363776 113 ntBASIC1.62□□□□□ -2.15
NPHS1O60500 RNU6-1134P-201ENST00000365156 101 ntBASIC1.62□□□□□ -2.15
NPHS1O60500 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
NPHS1O60500 MIR4500-201ENST00000579472 76 ntBASIC1.62□□□□□ -2.15
NPHS1O60500 Y_RNA.119-201ENST00000363301 96 ntBASIC1.61□□□□□ -2.15
NPHS1O60500 RNU6-1244P-201ENST00000363614 108 ntBASIC1.61□□□□□ -2.15
NPHS1O60500 MIR1302-4-201ENST00000408701 150 ntBASIC1.61□□□□□ -2.15
NPHS1O60500 MIR18B-201ENST00000454574 71 ntBASIC1.61□□□□□ -2.15
NPHS1O60500 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
NPHS1O60500 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPHS1O60500 HSBP1P2-201ENST00000299671 229 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 SNORD58A-201ENST00000383875 65 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 AC036111.3-201ENST00000526389 112 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.6□□□□□ -2.15
NPHS1O60500 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NPHS1O60500 U8.13-201ENST00000390842 128 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 RNY4P29-201ENST00000410801 97 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 SNORD83.1-201ENST00000411362 77 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 MIR4491-201ENST00000581087 68 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 AC062037.1-201ENST00000605302 128 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 AC020891.4-201ENST00000605745 93 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.59□□□□□ -2.15
NPHS1O60500 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.16
NPHS1O60500 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms