Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
HOXC11O43248 Y_RNA.272-201ENST00000364696 102 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 RNU6-469P-201ENST00000516253 101 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 RNA5SP33-201ENST00000516687 98 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 MIR6779-201ENST00000617283 64 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 uc_338.16-201ENST00000621804 95 ntBASIC0.57□□□□□ -2.32
HOXC11O43248 AL589743.1-201ENST00000551932 2712 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 Y_RNA.42-201ENST00000362660 108 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 RNU7-79P-201ENST00000516082 62 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 AC090425.1-201ENST00000610007 140 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 MIR6082-201ENST00000613604 109 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 MIR8066-201ENST00000617280 78 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
HOXC11O43248 RNU6-508P-201ENST00000363231 103 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 RNY1P13-201ENST00000365030 105 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 RNY1P4-201ENST00000384595 115 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 Y_RNA.584-201ENST00000391090 114 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 AC133485.4-201ENST00000561835 220 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 AC138907.4-201ENST00000570107 226 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 MIR4491-201ENST00000581087 68 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 MIR4305-201ENST00000583252 102 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
HOXC11O43248 Y_RNA.251-201ENST00000364551 99 ntBASIC0.54□□□□□ -2.32
HOXC11O43248 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
HOXC11O43248 RNU6-765P-201ENST00000516916 99 ntBASIC0.54□□□□□ -2.32
HOXC11O43248 RNU6-182P-201ENST00000516970 105 ntBASIC0.54□□□□□ -2.32
HOXC11O43248 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
HOXC11O43248 SNORD115-2-201ENST00000362842 82 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 SNORD115-20-201ENST00000365099 82 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 RNU4-11P-201ENST00000365287 132 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 RNU6-1130P-201ENST00000365434 107 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 Y_RNA.470-201ENST00000384307 117 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 Y_RNA.588-201ENST00000391254 102 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 SNORD71-201ENST00000411292 86 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 AC096949.1-201ENST00000412047 152 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 Y_RNA.651-201ENST00000459380 103 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 RNU6-240P-201ENST00000516098 97 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 Y_RNA.686-201ENST00000516548 134 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 AC021443.1-201ENST00000604478 211 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 FTX_2.1-201ENST00000618816 94 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
HOXC11O43248 Y_RNA.120-201ENST00000363304 110 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 PCNPP3-201ENST00000393579 471 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 SNORA25.12-201ENST00000516202 82 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 RNU2-35P-201ENST00000516446 142 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 RNU7-35P-201ENST00000517174 62 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 DEFB131E-201ENST00000532329 154 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 AC112693.2-201ENST00000556538 232 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 MIR3678-201ENST00000578455 94 ntBASIC0.52□□□□□ -2.33
HOXC11O43248 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 RNU6-151P-201ENST00000364158 107 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 RNU6-309P-201ENST00000364573 106 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 SNORA32-201ENST00000384072 121 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 Y_RNA.531-201ENST00000384589 121 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 RNU6-394P-201ENST00000410735 107 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 Y_RNA.778-201ENST00000620203 90 ntBASIC0.51□□□□□ -2.33
HOXC11O43248 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.5□□□□□ -2.33
HOXC11O43248 Y_RNA.150-201ENST00000363562 102 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 Y_RNA.174-201ENST00000363781 105 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 RNU6-449P-201ENST00000383914 107 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 SNORD116-18-201ENST00000383961 92 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 RNU6-804P-201ENST00000384286 107 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 RNU7-197P-201ENST00000458836 62 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 Y_RNA.690-201ENST00000516603 95 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 Y_RNA.697-201ENST00000516776 113 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 RNU6-794P-201ENST00000517261 64 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 AC010487.4-201ENST00000637027 61 ntBASIC0.5□□□□□ -2.33
HOXC11O43248 Y_RNA.299-201ENST00000364973 94 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 RNU6-886P-201ENST00000384319 105 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 Y_RNA.567-201ENST00000384736 106 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 Y_RNA.580-201ENST00000391004 95 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 AL603914.1-201ENST00000401964 204 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 RNU7-164P-201ENST00000459221 62 ntBASIC0.49□□□□□ -2.33
HOXC11O43248 Y_RNA.8-201ENST00000362353 102 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 Y_RNA.205-201ENST00000364128 113 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 Y_RNA.270-201ENST00000364693 104 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 RNU6-460P-201ENST00000391158 108 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 MIR3144-201ENST00000579460 79 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 MIR548AE2-201ENST00000583456 67 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
HOXC11O43248 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
HOXC11O43248 Y_RNA.366-201ENST00000365540 102 ntBASIC0.47□□□□□ -2.33
HOXC11O43248 Y_RNA.398-201ENST00000383952 99 ntBASIC0.47□□□□□ -2.33
HOXC11O43248 MIR513C-201ENST00000401352 84 ntBASIC0.47□□□□□ -2.33
HOXC11O43248 RNU7-123P-201ENST00000515911 60 ntBASIC0.47□□□□□ -2.33
HOXC11O43248 RNU5E-3P-201ENST00000515913 68 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 307.8 ms