Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL589743.1-201ENST00000551932 2712 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 U8.15-201ENST00000390947 134 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 SNORD89-201ENST00000390981 114 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 RNA5SP237-201ENST00000410414 113 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 TMSB4XP3-201ENST00000445144 114 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 RNU7-79P-201ENST00000516082 62 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.64□□□□□ -2.31
HDAC3O15379 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
HDAC3O15379 Y_RNA.261-201ENST00000364631 102 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 RNU6-81P-201ENST00000365608 104 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 MIR539-201ENST00000365690 78 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 Y_RNA.528-201ENST00000384575 108 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 RNU6-959P-201ENST00000384671 107 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 RNU6-1086P-201ENST00000410930 100 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 SNORA4-201ENST00000584302 138 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 AL365222.1-201ENST00000614661 98 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
HDAC3O15379 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
HDAC3O15379 Y_RNA.116-201ENST00000363292 103 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HDAC3O15379 RNU6-80P-201ENST00000384195 107 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 RNU6-1307P-201ENST00000391012 103 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 RNU4-69P-201ENST00000410677 143 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 FABP5P4-201ENST00000437203 171 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 MIR18B-201ENST00000454574 71 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 RNU6-659P-201ENST00000516454 104 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 SNORD67.1-201ENST00000516618 108 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 MIR4676-201ENST00000583078 72 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 MIR151B-201ENST00000584249 96 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 AC025166.1-201ENST00000612411 163 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 AC087741.2-201ENST00000619415 172 ntBASIC0.62□□□□□ -2.31
HDAC3O15379 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
HDAC3O15379 MTND5P18-201ENST00000445624 1801 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 SNORD116-14-201ENST00000383894 92 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 SNORD116-17-201ENST00000383929 92 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 RNU6-949P-201ENST00000384040 107 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 SNORD116-15-201ENST00000384445 92 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 SNORD116-19-201ENST00000384729 92 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 MT-TF-201ENST00000387314 71 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 Y_RNA.588-201ENST00000391254 102 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 RNU6-1333P-201ENST00000516162 93 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 SNORD33.1-201ENST00000516213 88 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 MIR4804-201ENST00000581683 73 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 Y_RNA.773-201ENST00000607168 90 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 AC105081.1-201ENST00000617727 106 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
HDAC3O15379 AL157777.2-201ENST00000258070 137 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 Y_RNA.198-201ENST00000364013 98 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNU6-616P-201ENST00000384353 107 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNA5SP136-201ENST00000410906 107 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNU4-61P-201ENST00000411243 107 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 AC067940.1-201ENST00000458411 300 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 RNU7-6P-201ENST00000516845 62 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 Y_RNA.712-201ENST00000517011 92 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 MIR8066-201ENST00000617280 78 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 MIR1255B1-201ENST00000636325 63 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 MIR3914-2-201ENST00000637339 95 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 AC132825.6-201ENST00000638861 357 ntBASIC0.6□□□□□ -2.31
HDAC3O15379 MIR1-1-201ENST00000362147 71 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 Y_RNA.127-201ENST00000363386 109 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 MIR125B2-201ENST00000385128 89 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
HDAC3O15379 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
HDAC3O15379 MIR1257-201ENST00000408490 117 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 SNORD99-201ENST00000408612 74 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 SNORD93-201ENST00000408813 74 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 RNU6-977P-201ENST00000516411 103 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 MIR4491-201ENST00000581087 68 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 AL353765.1-201ENST00000605514 183 ntBASIC0.59□□□□□ -2.31
HDAC3O15379 Y_RNA.344-201ENST00000365381 112 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 MIR520F-201ENST00000384824 87 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 MIR206-201ENST00000384872 86 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.58□□□□□ -2.32
HDAC3O15379 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 RNA5SP220-201ENST00000516298 104 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 SNORA25.16-201ENST00000516741 121 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms