Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 SNORD64-201ENST00000386683 67 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 AC099799.1-201ENST00000439809 192 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 AC007012.1-201ENST00000567192 175 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 AL365205.2-201ENST00000594586 68 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU4-10P-201ENST00000364383 140 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU6-431P-201ENST00000383874 107 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 AC016907.1-201ENST00000419483 435 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU6-507P-201ENST00000516045 100 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 SCARNA15-202ENST00000516881 127 ntBASIC-1.69□□□□□ -2.68
HMGB3O15347 RNU6-170P-201ENST00000362832 104 ntBASIC-1.7□□□□□ -2.68
HMGB3O15347 RNU6-890P-201ENST00000384121 107 ntBASIC-1.7□□□□□ -2.68
HMGB3O15347 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.7□□□□□ -2.68
HMGB3O15347 AC048344.4-201ENST00000619744 527 ntBASIC-1.7□□□□□ -2.68
HMGB3O15347 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 RNU6-358P-201ENST00000516564 75 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 RNU6-314P-201ENST00000516574 104 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 RNU6-570P-201ENST00000517051 105 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.71□□□□□ -2.68
HMGB3O15347 MIR548AE2-201ENST00000583456 67 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 AC138207.3-201ENST00000585289 166 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 AC006006.1-201ENST00000603082 144 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 MIR382-201ENST00000637119 76 ntBASIC-1.71□□□□□ -2.68
HMGB3O15347 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 SNORA51.5-201ENST00000384126 131 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 MIR147A-201ENST00000385079 72 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNA5SP266-201ENST00000410273 108 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNU7-106P-201ENST00000459514 67 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNU6-287P-201ENST00000516230 98 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNU6-506P-201ENST00000516553 94 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNA5SP476-201ENST00000516613 103 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 MIR5704-201ENST00000584029 77 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 MIR4272-201ENST00000635924 64 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
HMGB3O15347 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 RNU4-14P-201ENST00000410858 122 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 HLA-S-202ENST00000425174 53 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 RNU7-48P-201ENST00000458875 63 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 RNA5SP461-201ENST00000516451 104 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 MIR6854-201ENST00000614935 69 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 U4.1-201ENST00000620349 87 ntBASIC-1.73□□□□□ -2.69
HMGB3O15347 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 MIR181A1-201ENST00000385026 110 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 SNORD2-201ENST00000459163 69 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 U8.20-201ENST00000459445 131 ntBASIC-1.74□□□□□ -2.69
HMGB3O15347 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.74□□□□□ -2.69
HMGB3O15347 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.75□□□□□ -2.69
HMGB3O15347 SNORD115-35-201ENST00000365122 82 ntBASIC-1.75□□□□□ -2.69
HMGB3O15347 RNY1P6-201ENST00000384193 109 ntBASIC-1.75□□□□□ -2.69
HMGB3O15347 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.75□□□□□ -2.69
HMGB3O15347 MIR5690-201ENST00000583739 73 ntBASIC-1.75□□□□□ -2.69
HMGB3O15347 RPS29P30-201ENST00000600975 111 ntBASIC-1.75□□□□□ -2.69
HMGB3O15347 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.76□□□□□ -2.69
HMGB3O15347 AL731563.1-201ENST00000442202 214 ntBASIC-1.76□□□□□ -2.69
HMGB3O15347 RNU6-571P-201ENST00000384128 107 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 RNU6-476P-201ENST00000384726 107 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 MIR559-201ENST00000385188 96 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 MT-TT-201ENST00000387460 66 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 RNU2-16P-201ENST00000410712 136 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 MIR1270-201ENST00000459320 83 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 AP001362.1-201ENST00000625165 124 ntBASIC-1.77□□□□□ -2.69
HMGB3O15347 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 HSPE1P25-201ENST00000455484 251 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 HAR1A.1-201ENST00000459583 118 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.78□□□□□ -2.69
HMGB3O15347 SNORD113-8-201ENST00000363497 74 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 RNU6-370P-201ENST00000411008 104 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 RNU6-699P-201ENST00000517081 110 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 AC026421.1-201ENST00000519101 163 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 PART1_1.1-201ENST00000611761 217 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 MIR8068-201ENST00000618032 68 ntBASIC-1.79□□□□□ -2.7
HMGB3O15347 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 MIR206-201ENST00000384872 86 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 AC082651.2-201ENST00000496833 166 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.8□□□□□ -2.7
HMGB3O15347 snoU83B.1-201ENST00000517136 88 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms