Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU1-98P-201ENST00000458992 160 ntBASIC2.47□□□□□ -2.01
ATG3Q9NT62 SNORD13-201ENST00000459299 104 ntBASIC2.47□□□□□ -2.01
ATG3Q9NT62 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.47□□□□□ -2.01
ATG3Q9NT62 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATG3Q9NT62 RNA5SP190-201ENST00000365222 118 ntBASIC2.46□□□□□ -2.02
ATG3Q9NT62 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ATG3Q9NT62 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.46□□□□□ -2.02
ATG3Q9NT62 AC025033.1-201ENST00000463883 194 ntBASIC2.46□□□□□ -2.02
ATG3Q9NT62 RPS29P11-201ENST00000496507 171 ntBASIC2.46□□□□□ -2.02
ATG3Q9NT62 SNORD67.1-201ENST00000516618 108 ntBASIC2.46□□□□□ -2.02
ATG3Q9NT62 Y_RNA.448-201ENST00000384185 108 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 Y_RNA.567-201ENST00000384736 106 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 RNA5SP501-201ENST00000410990 112 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 AC245047.7-201ENST00000440265 293 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 RNVU1-2-201ENST00000516326 135 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 MIR4712-201ENST00000583750 82 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 AC105081.1-201ENST00000617727 106 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 MIR8065-201ENST00000620577 100 ntBASIC2.45□□□□□ -2.02
ATG3Q9NT62 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATG3Q9NT62 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.44□□□□□ -2.02
ATG3Q9NT62 RNU6-1229P-201ENST00000364295 107 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 MIR17-201ENST00000385012 84 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 RNU6-1321P-201ENST00000390905 107 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 MIR548G-201ENST00000408442 89 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 RPL31P63-201ENST00000422565 375 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 RPS29P28-201ENST00000446439 141 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 RNA5SP437-201ENST00000517249 129 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.44□□□□□ -2.02
ATG3Q9NT62 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.44□□□□□ -2.02
ATG3Q9NT62 snoU13.31-201ENST00000607291 104 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 AC021506.2-201ENST00000612354 169 ntBASIC2.44□□□□□ -2.02
ATG3Q9NT62 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.44□□□□□ -2.02
ATG3Q9NT62 Y_RNA.226-201ENST00000364337 114 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 RNA5SP160-201ENST00000364866 120 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 RNU4-52P-201ENST00000384209 138 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 AC099513.1-201ENST00000490423 301 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 RNU7-79P-201ENST00000516082 62 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 AL513043.2-201ENST00000573941 143 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 MIR4287-201ENST00000579398 78 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 MIR4781-201ENST00000585250 76 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 MIR8081-201ENST00000611533 95 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 U1.36-201ENST00000620684 176 ntBASIC2.43□□□□□ -2.02
ATG3Q9NT62 RNA5SP138-201ENST00000365098 114 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 RNA5SP37-201ENST00000365420 130 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 RNU6-717P-201ENST00000459076 104 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 MIR514B-201ENST00000516774 80 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 RNU6-90P-201ENST00000606352 106 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 AC084768.2-201ENST00000622736 221 ntBASIC2.42□□□□□ -2.02
ATG3Q9NT62 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.42□□□□□ -2.02
ATG3Q9NT62 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATG3Q9NT62 Y_RNA.173-201ENST00000363776 113 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 Y_RNA.537-201ENST00000384626 109 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 RNU6-1086P-201ENST00000410930 100 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 AL356379.1-201ENST00000414105 126 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 AL161932.1-201ENST00000437408 146 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.41□□□□□ -2.02
ATG3Q9NT62 SNORA25.15-201ENST00000516487 89 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 RNU7-137P-201ENST00000516788 62 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 RNU6-250P-201ENST00000516958 103 ntBASIC2.41□□□□□ -2.02
ATG3Q9NT62 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
ATG3Q9NT62 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG3Q9NT62 MIR378A-201ENST00000362177 66 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 MIR181B2-201ENST00000385004 89 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 RNU6-602P-201ENST00000411155 105 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 SPINT5P-201ENST00000448174 155 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 AC093729.1-201ENST00000513074 128 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 RNU1-40P-201ENST00000516816 164 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 RNU1-97P-201ENST00000516872 164 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 FAM106DP-201ENST00000586416 501 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 SNORD3E-202ENST00000627253 216 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 Z97988.1-201ENST00000637697 135 ntBASIC2.4□□□□□ -2.03
ATG3Q9NT62 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG3Q9NT62 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG3Q9NT62 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG3Q9NT62 RNU6-865P-201ENST00000364772 107 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 Y_RNA.565-201ENST00000384719 101 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 MIR660-201ENST00000385235 97 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 RNU4-62P-201ENST00000410125 130 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 RPL23AP6-201ENST00000446637 472 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 snoU13.16-201ENST00000459350 104 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 RPS27P21-201ENST00000486977 252 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 RNU7-153P-201ENST00000516455 62 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 AC140658.3-201ENST00000567603 271 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 AL773524.1-201ENST00000614065 229 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 AP000648.3-201ENST00000623539 4507 ntBASIC2.39□□□□□ -2.03
ATG3Q9NT62 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG3Q9NT62 RNU6-296P-201ENST00000384608 107 ntBASIC2.38□□□□□ -2.03
ATG3Q9NT62 MIR519C-201ENST00000385053 87 ntBASIC2.38□□□□□ -2.03
ATG3Q9NT62 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ATG3Q9NT62 RNU6-788P-201ENST00000390967 104 ntBASIC2.38□□□□□ -2.03
ATG3Q9NT62 SUB1P4-201ENST00000566062 339 ntBASIC2.38□□□□□ -2.03
ATG3Q9NT62 AC012676.2-201ENST00000619258 186 ntBASIC2.38□□□□□ -2.03
ATG3Q9NT62 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG3Q9NT62 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG3Q9NT62 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ATG3Q9NT62 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ATG3Q9NT62 SNORA2B-201ENST00000384583 137 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 584.8 ms