Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL022718.1-201ENST00000412004 84 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 AL512326.2-201ENST00000426359 151 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 RPL39P25-201ENST00000449384 154 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 RNU7-113P-201ENST00000459273 62 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.651-201ENST00000459380 103 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 RNU6-240P-201ENST00000516098 97 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 RNU2-35P-201ENST00000516446 142 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 MIR4305-201ENST00000583252 102 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 AC011603.4-201ENST00000611325 277 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 SNORD115-2-201ENST00000362842 82 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 SNORD115-20-201ENST00000365099 82 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 MTATP6P21-201ENST00000440681 189 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 RNU7-79P-201ENST00000516082 62 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 RNU6-448P-201ENST00000517052 107 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 RNU7-35P-201ENST00000517174 62 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 MIR4491-201ENST00000581087 68 ntBASIC0.56□□□□□ -2.32
CHMP1AQ9HD42 RNU4-45P-201ENST00000365469 141 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.584-201ENST00000391090 114 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.617-201ENST00000410920 90 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.686-201ENST00000516548 134 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 RNA5SP33-201ENST00000516687 98 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 MIR4769-201ENST00000584126 77 ntBASIC0.55□□□□□ -2.32
CHMP1AQ9HD42 RNU6-403P-201ENST00000363163 104 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 RNU6-309P-201ENST00000364573 106 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 AC112693.2-201ENST00000556538 232 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 MIR6082-201ENST00000613604 109 ntBASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.54□□□□□ -2.32
CHMP1AQ9HD42 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 RNU4-11P-201ENST00000365287 132 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 SNORA32-201ENST00000384072 121 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 Y_RNA.531-201ENST00000384589 121 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 AC133485.4-201ENST00000561835 220 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 AC133485.1-201ENST00000567176 124 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 AC138907.4-201ENST00000570107 226 ntBASIC0.53□□□□□ -2.32
CHMP1AQ9HD42 RNU6-1130P-201ENST00000365434 107 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 RNU7-197P-201ENST00000458836 62 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.690-201ENST00000516603 95 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 MIR548AE2-201ENST00000583456 67 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 AC021443.1-201ENST00000604478 211 ntBASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CHMP1AQ9HD42 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 RNA5SP117-201ENST00000365294 118 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 SNORD18B-201ENST00000365659 72 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 RNU6-679P-201ENST00000391003 106 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 AL603914.1-201ENST00000401964 204 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 RNU6-394P-201ENST00000410735 107 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 RNU7-164P-201ENST00000459221 62 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 SNORA25.16-201ENST00000516741 121 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 RNU6-182P-201ENST00000516970 105 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 MIR4498-201ENST00000577599 66 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 MIR3678-201ENST00000578455 94 ntBASIC0.51□□□□□ -2.33
CHMP1AQ9HD42 MIR373-201ENST00000362273 69 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 RNU6-151P-201ENST00000364158 107 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.338-201ENST00000365320 114 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 SNORA72.6-201ENST00000384520 129 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.580-201ENST00000391004 95 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 RNU6-321P-201ENST00000410912 106 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 MIR1270-201ENST00000459320 83 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 RNU7-123P-201ENST00000515911 60 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.778-201ENST00000620203 90 ntBASIC0.5□□□□□ -2.33
CHMP1AQ9HD42 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.366-201ENST00000365540 102 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 RNU6-449P-201ENST00000383914 107 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 MIR520E-201ENST00000384867 87 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 PCNPP3-201ENST00000393579 471 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 AL359881.1-201ENST00000602916 267 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 AC108081.1-201ENST00000604358 221 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 uc_338.16-201ENST00000621804 95 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 MIR6767-201ENST00000637302 66 ntBASIC0.49□□□□□ -2.33
CHMP1AQ9HD42 RNY1P10-201ENST00000363268 113 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 SNORD67.1-201ENST00000516618 108 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 RNU7-137P-201ENST00000516788 62 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 RNA5SP102-201ENST00000516865 106 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 AC090425.1-201ENST00000610007 140 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 FTX_2.1-201ENST00000618816 94 ntBASIC0.48□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.32-201ENST00000362589 110 ntBASIC0.47□□□□□ -2.33
CHMP1AQ9HD42 Y_RNA.298-201ENST00000364960 107 ntBASIC0.47□□□□□ -2.33
CHMP1AQ9HD42 SNORD116-18-201ENST00000383961 92 ntBASIC0.47□□□□□ -2.33
CHMP1AQ9HD42 RNU6-804P-201ENST00000384286 107 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms