Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.47□□□□□ -2.33
NANOGQ9H9S0 AC141846.1-201ENST00000568348 142 ntBASIC0.47□□□□□ -2.33
NANOGQ9H9S0 MIR8066-201ENST00000617280 78 ntBASIC0.47□□□□□ -2.33
NANOGQ9H9S0 AL662814.1-201ENST00000617364 121 ntBASIC0.47□□□□□ -2.33
NANOGQ9H9S0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
NANOGQ9H9S0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
NANOGQ9H9S0 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 SNORA18-201ENST00000384416 132 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 RNA5SP144-201ENST00000410846 116 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 AL512326.2-201ENST00000426359 151 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 MIR1270-201ENST00000459320 83 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.651-201ENST00000459380 103 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 AC107027.2-201ENST00000512197 115 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.686-201ENST00000516548 134 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 MIR3612-201ENST00000579753 87 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 AC072026.1-201ENST00000605023 201 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.251-201ENST00000364551 99 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNY1P6-201ENST00000384193 109 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.552-201ENST00000384665 112 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNU6-239P-201ENST00000390990 99 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 MIR938-201ENST00000401216 83 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNU6-1135P-201ENST00000411083 103 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNU7-120P-201ENST00000459334 63 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 RNU2-35P-201ENST00000516446 142 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 SNORD92-201ENST00000585078 85 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 AC004792.1-201ENST00000614523 137 ntBASIC0.45□□□□□ -2.34
NANOGQ9H9S0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
NANOGQ9H9S0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNU6-309P-201ENST00000364573 106 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.257-201ENST00000364596 102 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNY1P13-201ENST00000365030 105 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.337-201ENST00000365312 102 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNU6-1130P-201ENST00000365434 107 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.441-201ENST00000384123 112 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 MIR1257-201ENST00000408490 117 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 RNU7-70P-201ENST00000516941 66 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 MIR7111-201ENST00000619751 72 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 MIR6844-201ENST00000637122 62 ntBASIC0.44□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 MT-TF-201ENST00000387314 71 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 RNU6-240P-201ENST00000516098 97 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 SNORA81.3-201ENST00000517283 198 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.43□□□□□ -2.34
NANOGQ9H9S0 MIR3152-201ENST00000579801 74 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.120-201ENST00000363304 110 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORA32-201ENST00000384072 121 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNU6-364P-201ENST00000384387 107 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORA20-201ENST00000384662 132 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORA75.5-201ENST00000391291 81 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 PCNPP3-201ENST00000393579 471 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNA5SP237-201ENST00000410414 113 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNA5SP261-201ENST00000410536 106 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNU7-197P-201ENST00000458836 62 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 AC002350.1-201ENST00000490759 375 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 SNORA25.16-201ENST00000516741 121 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 MIR4491-201ENST00000581087 68 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 AL359881.1-201ENST00000602916 267 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 AC108081.1-201ENST00000604358 221 ntBASIC0.42□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.29-201ENST00000362570 113 ntBASIC0.41□□□□□ -2.34
NANOGQ9H9S0 Y_RNA.272-201ENST00000364696 102 ntBASIC0.41□□□□□ -2.34
NANOGQ9H9S0 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
NANOGQ9H9S0 RNU7-79P-201ENST00000516082 62 ntBASIC0.41□□□□□ -2.34
NANOGQ9H9S0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.41□□□□□ -2.34
NANOGQ9H9S0 DNAJC19P2-201ENST00000593340 302 ntBASIC0.41□□□□□ -2.34
NANOGQ9H9S0 RNU6-690P-201ENST00000365242 106 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU4-11P-201ENST00000365287 132 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 Y_RNA.357-201ENST00000365487 109 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 Y_RNA.366-201ENST00000365540 102 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-949P-201ENST00000384040 107 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-804P-201ENST00000384286 107 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 Y_RNA.785-201ENST00000384290 109 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-460P-201ENST00000391158 108 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-447P-201ENST00000410293 104 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.4□□□□□ -2.35
NANOGQ9H9S0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms