Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR548AO-201ENST00000579992 96 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 SNORD92-201ENST00000585078 85 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 AL513423.1-201ENST00000621695 132 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 SNORD38B-202ENST00000625943 69 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 SNORA25.4-201ENST00000363666 124 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 RNU6-154P-201ENST00000384306 106 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 AC019129.1-201ENST00000403786 261 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 RNU7-43P-201ENST00000516554 64 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 SNORA64.4-201ENST00000516632 81 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 MIR4506-201ENST00000584693 77 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL25A1Q9BXS0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 MIRLET7F1-201ENST00000362202 87 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 RNU1-58P-201ENST00000362413 163 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 snoU13.17-201ENST00000458802 104 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 AC021506.2-201ENST00000612354 169 ntBASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL25A1Q9BXS0 RNU6-614P-201ENST00000384369 107 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 MIR516A2-201ENST00000384888 90 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 MIR516A1-201ENST00000385033 90 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 U8.13-201ENST00000390842 128 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 RNU6-243P-201ENST00000391140 107 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 SNORA17.3-201ENST00000391159 129 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 AC092628.1-201ENST00000436250 252 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 MIR2276-201ENST00000516886 89 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 MIR4764-201ENST00000580680 88 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 AL161722.3-201ENST00000605789 2983 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 U6.59-201ENST00000615686 107 ntBASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL25A1Q9BXS0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 MIR30E-201ENST00000362104 92 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 SNORD115-3-201ENST00000363100 82 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 Y_RNA.443-201ENST00000384135 111 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 AL023284.1-201ENST00000403956 276 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 HMGN1P18-201ENST00000457642 277 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 RPS29P12-201ENST00000460178 152 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 U6.109-201ENST00000636749 87 ntBASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
COL25A1Q9BXS0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 MIR148B-201ENST00000362252 99 ntBASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 RNU6-291P-201ENST00000384720 107 ntBASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 HMGN2P39-201ENST00000398005 273 ntBASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 MIR6873-201ENST00000622788 63 ntBASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL25A1Q9BXS0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 RNU6-42P-201ENST00000384165 107 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 RNU6-466P-201ENST00000391224 103 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 AC104332.2-201ENST00000429959 156 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 AC079150.2-201ENST00000443733 78 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 AC099513.1-201ENST00000490423 301 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 RNA5SP385-201ENST00000515947 110 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 AC121758.2-201ENST00000553271 193 ntBASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.64□□□□□ -1.99
COL25A1Q9BXS0 Y_RNA.42-201ENST00000362660 108 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 RNU6-340P-201ENST00000364005 107 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 RNU6-669P-201ENST00000365575 107 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 AC245166.1-201ENST00000521012 253 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 AC026271.5-201ENST00000577873 130 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 MIR4511-201ENST00000582784 87 ntBASIC2.63□□□□□ -1.99
COL25A1Q9BXS0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 RNU6-895P-201ENST00000384125 103 ntBASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 BX510359.4-201ENST00000423750 193 ntBASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 AC103706.3-201ENST00000636297 85 ntBASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
COL25A1Q9BXS0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 AL355596.1-201ENST00000565399 3996 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 RNU6-957P-201ENST00000363652 99 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 RNU6-681P-201ENST00000364012 104 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 SNORD45A-201ENST00000384512 84 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 361.4 ms