Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 Y_RNA.171-201ENST00000363760 102 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 Y_RNA.215-201ENST00000364204 112 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 Y_RNA.351-201ENST00000365436 96 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 SNORA24-201ENST00000384096 131 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 RNU6-1104P-201ENST00000384723 104 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CDX2Q99626 RNU6-205P-201ENST00000390858 107 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 RNU7-67P-201ENST00000459003 62 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 RNU2-11P-201ENST00000459191 187 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 MIR1270-201ENST00000459320 83 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 AC107027.2-201ENST00000512197 115 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 Y_RNA.714-201ENST00000517065 90 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.52□□□□□ -2.33
CDX2Q99626 AC112693.2-201ENST00000556538 232 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 MIR4662B-201ENST00000579498 81 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 DNAJC19P2-201ENST00000593340 302 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 RNU6-94P-201ENST00000607728 107 ntBASIC0.52□□□□□ -2.33
CDX2Q99626 MIR103A2-201ENST00000362154 78 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-349P-201ENST00000362402 107 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-34-201ENST00000362441 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-12-201ENST00000362583 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-29-201ENST00000362834 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-9-201ENST00000362912 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-21-201ENST00000362963 81 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-14-201ENST00000363090 81 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-13-201ENST00000363358 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-41-201ENST00000363608 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-11-201ENST00000363616 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-5-201ENST00000363633 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-39-201ENST00000363694 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-4-201ENST00000363810 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-16-201ENST00000363887 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-6-201ENST00000363942 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNA5SP48-201ENST00000363969 126 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-42-201ENST00000364273 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU4-67P-201ENST00000364569 141 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-15-201ENST00000364809 81 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-1-201ENST00000364961 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-26-201ENST00000365067 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-10-201ENST00000365073 81 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 Y_RNA.337-201ENST00000365312 102 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 Y_RNA.357-201ENST00000365487 109 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-43-201ENST00000365503 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-36-201ENST00000365629 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-1292P-201ENST00000383856 107 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-449P-201ENST00000383914 107 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORA51.10-201ENST00000384418 136 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 MIR624-201ENST00000385217 97 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORA40.5-201ENST00000391061 128 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD37.2-201ENST00000391075 66 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 AL603914.1-201ENST00000401964 204 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-257P-201ENST00000410238 98 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.51□□□□□ -2.33
CDX2Q99626 RPS29P24-201ENST00000486345 171 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 COX6CP6-201ENST00000490840 228 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 AC113410.1-201ENST00000505029 247 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-998P-201ENST00000515894 101 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU5E-3P-201ENST00000515913 68 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU2-35P-201ENST00000516446 142 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU7-43P-201ENST00000516554 64 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-1212P-201ENST00000517023 104 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 AC022523.2-201ENST00000561045 150 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 SNORD115-40-201ENST00000606510 82 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 MIR6740-201ENST00000618268 113 ntBASIC0.51□□□□□ -2.33
CDX2Q99626 RNU6-369P-201ENST00000362515 102 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 RNU6-235P-201ENST00000362644 107 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 SNORA25.7-201ENST00000364375 127 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 SNORA1.1-201ENST00000364671 133 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 Y_RNA.366-201ENST00000365540 102 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 RNU6-1062P-201ENST00000383908 107 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 Y_RNA.400-201ENST00000383963 111 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 Y_RNA.420-201ENST00000384043 110 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 Y_RNA.464-201ENST00000384282 110 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 Y_RNA.470-201ENST00000384307 117 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 RNU6-602P-201ENST00000411155 105 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 MTND4LP9-201ENST00000427694 174 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 RNU6-240P-201ENST00000516098 97 ntBASIC0.5□□□□□ -2.33
CDX2Q99626 RNU6-915P-201ENST00000364943 103 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNA5SP331-201ENST00000364986 107 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 Y_RNA.410-201ENST00000383992 113 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 Y_RNA.537-201ENST00000384626 109 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 SNORA75.5-201ENST00000391291 81 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 SNORA79-201ENST00000408376 140 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6-735P-201ENST00000410612 107 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 SNORD83.1-201ENST00000411362 77 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 Y_RNA.630-201ENST00000411370 108 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 AC087499.4-201ENST00000448505 178 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU7-107P-201ENST00000459121 61 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 U7.7-201ENST00000459276 60 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6-781P-201ENST00000516377 101 ntBASIC0.49□□□□□ -2.33
CDX2Q99626 RNU6-1234P-201ENST00000516877 103 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 309.9 ms