Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
PKP4Q99569 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
PKP4Q99569 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 RNU6-44P-201ENST00000384045 107 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
PKP4Q99569 RNY4P18-201ENST00000391107 89 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 RNU6-412P-201ENST00000516434 106 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 RNA5SP33-201ENST00000516687 98 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
PKP4Q99569 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 Y_RNA.281-201ENST00000364774 94 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 Y_RNA.470-201ENST00000384307 117 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 MIR548D2-201ENST00000384955 97 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 RNU4-69P-201ENST00000410677 143 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 MTATP6P29-201ENST00000415057 132 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 RNU7-6P-201ENST00000516845 62 ntBASIC1.17□□□□□ -2.22
PKP4Q99569 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
PKP4Q99569 AL589743.1-201ENST00000551932 2712 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 SNORA25.3-201ENST00000363205 127 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 Y_RNA.362-201ENST00000365518 110 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 SNORD12C-201ENST00000386307 89 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 MIR1302-7-201ENST00000408841 72 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
PKP4Q99569 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.16□□□□□ -2.22
PKP4Q99569 MIR548AE2-201ENST00000583456 67 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
PKP4Q99569 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
PKP4Q99569 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PKP4Q99569 Y_RNA.85-201ENST00000363014 111 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 RNU6-396P-201ENST00000365369 105 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 SNORA22-201ENST00000383907 134 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 Y_RNA.549-201ENST00000384657 102 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 RNU6-1054P-201ENST00000411293 104 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 AC087741.2-201ENST00000619415 172 ntBASIC1.15□□□□□ -2.23
PKP4Q99569 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
PKP4Q99569 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
PKP4Q99569 MIR103A2-201ENST00000362154 78 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 RNA5SP264-201ENST00000363115 107 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 RNU6-755P-201ENST00000364400 103 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 SNORA25.9-201ENST00000365087 128 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 SNORD77B-201ENST00000391112 67 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 RPL39P34-201ENST00000477141 156 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 MIR2115-201ENST00000516657 100 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 AL035470.1-201ENST00000622571 220 ntBASIC1.14□□□□□ -2.23
PKP4Q99569 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PKP4Q99569 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PKP4Q99569 Y_RNA.49-201ENST00000362714 112 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORD115-19-201ENST00000363098 82 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORD115-18-201ENST00000363293 82 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORA63.5-201ENST00000363548 123 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORD115-17-201ENST00000364612 82 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 RNU6-1107P-201ENST00000364817 104 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 Y_RNA.344-201ENST00000365381 112 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORA18-201ENST00000384416 132 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 MIR1185-1-201ENST00000408598 86 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 AC244023.1-201ENST00000426884 112 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 PDCD5P2-201ENST00000507570 312 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 AP000753.3-201ENST00000604083 169 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 AC242498.1-201ENST00000604134 111 ntBASIC1.13□□□□□ -2.23
PKP4Q99569 SNORA63.4-201ENST00000362763 126 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 Y_RNA.309-201ENST00000365046 111 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 SNORA32-201ENST00000384072 121 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 RNU6-342P-201ENST00000384521 104 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 MIR499A-201ENST00000384903 122 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.12□□□□□ -2.23
PKP4Q99569 MIR8070-201ENST00000616510 88 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 MIR6516-201ENST00000630554 81 ntBASIC1.12□□□□□ -2.23
PKP4Q99569 Y_RNA.226-201ENST00000364337 114 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 MIR1912-201ENST00000410389 80 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 RNU6-1086P-201ENST00000410930 100 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 snoU13.2-201ENST00000459201 104 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 MIR1270-201ENST00000459320 83 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 AC068339.1-201ENST00000526965 141 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 RNU6-94P-201ENST00000607728 107 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 AL162726.3-218ENST00000636401 95 ntBASIC1.11□□□□□ -2.23
PKP4Q99569 U8.6-201ENST00000364939 135 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 Y_RNA.323-201ENST00000365157 109 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 Y_RNA.507-201ENST00000384500 99 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 MIR1287-201ENST00000408492 90 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 RNA5SP237-201ENST00000410414 113 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms