Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC025166.1-201ENST00000612411 163 ntBASIC1.22□□□□□ -2.21
VPS50Q96JG6 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
VPS50Q96JG6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.21□□□□□ -2.22
VPS50Q96JG6 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
VPS50Q96JG6 RNU6-1117P-201ENST00000384525 104 ntBASIC1.21□□□□□ -2.22
VPS50Q96JG6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
VPS50Q96JG6 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
VPS50Q96JG6 RNU6-94P-201ENST00000607728 107 ntBASIC1.21□□□□□ -2.22
VPS50Q96JG6 MTND5P18-201ENST00000445624 1801 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 MIR377-201ENST00000362145 69 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 SNORD113.3-201ENST00000364630 78 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 AC015818.7-201ENST00000428754 109 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 AC087499.7-201ENST00000441958 109 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 Y_RNA.712-201ENST00000517011 92 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
VPS50Q96JG6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
VPS50Q96JG6 MIR563-201ENST00000385080 79 ntBASIC1.19□□□□□ -2.22
VPS50Q96JG6 RNA5SP136-201ENST00000410906 107 ntBASIC1.19□□□□□ -2.22
VPS50Q96JG6 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
VPS50Q96JG6 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
VPS50Q96JG6 MIR3914-2-201ENST00000637339 95 ntBASIC1.19□□□□□ -2.22
VPS50Q96JG6 MIR30D-201ENST00000362283 70 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 RNU6-1168P-201ENST00000390831 104 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 SNORD12-201ENST00000391002 90 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 MIR1287-201ENST00000408492 90 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 AC008267.6-201ENST00000441664 139 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 SNORD33.1-201ENST00000516213 88 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 MIR8070-201ENST00000616510 88 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 AL662814.1-201ENST00000617364 121 ntBASIC1.18□□□□□ -2.22
VPS50Q96JG6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 RNA5SP237-201ENST00000410414 113 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 RNU4-69P-201ENST00000410677 143 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 COX6CP6-201ENST00000490840 228 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 AC141846.1-201ENST00000568348 142 ntBASIC1.17□□□□□ -2.22
VPS50Q96JG6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS50Q96JG6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNU6-1154P-201ENST00000391001 104 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 SNORD111-201ENST00000408139 94 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNU7-79P-201ENST00000516082 62 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNU6-62P-201ENST00000516526 102 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 RNU7-35P-201ENST00000517174 62 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 AC012676.2-201ENST00000619258 186 ntBASIC1.16□□□□□ -2.22
VPS50Q96JG6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
VPS50Q96JG6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS50Q96JG6 RNY1P13-201ENST00000365030 105 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 RNU7-6P-201ENST00000516845 62 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 AL359881.1-201ENST00000602916 267 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 AC087741.2-201ENST00000619415 172 ntBASIC1.15□□□□□ -2.23
VPS50Q96JG6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 RNU6-479P-201ENST00000516348 105 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 MIR6504-201ENST00000613520 61 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS50Q96JG6 AL589743.1-201ENST00000551932 2712 ntBASIC1.14□□□□□ -2.23
VPS50Q96JG6 RNU6-369P-201ENST00000362515 102 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 RNA5SP205-201ENST00000364653 136 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 RNU6-934P-201ENST00000365154 107 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 Y_RNA.353-201ENST00000365440 108 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS50Q96JG6 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 AC020891.4-201ENST00000605745 93 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 Y_RNA.773-201ENST00000607168 90 ntBASIC1.13□□□□□ -2.23
VPS50Q96JG6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS50Q96JG6 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 RNU6-616P-201ENST00000384353 107 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 Y_RNA.563-201ENST00000384707 108 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 MIR548A1-201ENST00000385041 97 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 RNU2-51P-201ENST00000410708 197 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 RNU6-313P-201ENST00000516317 112 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 SNORD67.1-201ENST00000516618 108 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 MIR4771-2-201ENST00000577758 74 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 MIR4771-1-201ENST00000582617 74 ntBASIC1.12□□□□□ -2.23
VPS50Q96JG6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS50Q96JG6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 RNU6-949P-201ENST00000384040 107 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 RNU6-994P-201ENST00000410507 111 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 AC096949.1-201ENST00000412047 152 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 MIR3163-201ENST00000581592 73 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms