Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RPS29P29-201ENST00000456396 171 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNU7-73P-201ENST00000458743 63 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 TRMT112P2-201ENST00000512910 132 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNA5SP33-201ENST00000516687 98 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNU6-1006P-201ENST00000516998 103 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 MIR3152-201ENST00000579801 74 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 AL020996.3-201ENST00000606617 222 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 SNORD116-22-201ENST00000384430 92 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 RNU6-279P-201ENST00000391297 101 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 RNU6-887P-201ENST00000410660 100 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX1Q92499 UBL5P1-201ENST00000507979 193 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 Y_RNA.705-201ENST00000516862 110 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 MIR548AR-201ENST00000582191 57 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 MIR4439-201ENST00000583746 80 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
DDX1Q92499 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
DDX1Q92499 Y_RNA.96-201ENST00000363092 109 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 MIR30A-201ENST00000385092 71 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 SNORD28B-201ENST00000390993 75 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 SNORD77B-201ENST00000391112 67 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 Y_RNA.620-201ENST00000411009 88 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 AC090844.1-201ENST00000422019 156 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 RNU7-53P-201ENST00000516705 60 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 RNU6-958P-201ENST00000516995 106 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 DNAJC19P9-201ENST00000555084 351 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 AC103810.8-201ENST00000607347 118 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.11□□□□□ -2.07
DDX1Q92499 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
DDX1Q92499 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
DDX1Q92499 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
DDX1Q92499 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
DDX1Q92499 Y_RNA.247-201ENST00000364500 92 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 RNA5SP259-201ENST00000365541 109 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 SNORD58A-201ENST00000383875 65 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 SNORA70.7-201ENST00000384159 133 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 MIR513A1-201ENST00000385138 129 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 MIR136-201ENST00000385207 82 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 AL161935.2-201ENST00000414627 60 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 snoU13.9-201ENST00000458927 103 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.1□□□□□ -2.07
DDX1Q92499 SNORA77B-201ENST00000578179 125 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 MIR8055-201ENST00000610739 97 ntBASIC2.1□□□□□ -2.07
DDX1Q92499 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
DDX1Q92499 RNU6-242P-201ENST00000384359 107 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 MIR526A1-201ENST00000384897 85 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 RNU6-1307P-201ENST00000391012 103 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 RNA5SP261-201ENST00000410536 106 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 MIR4791-201ENST00000607666 84 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 AC243994.1-201ENST00000618627 109 ntBASIC2.09□□□□□ -2.07
DDX1Q92499 RNU6-457P-201ENST00000363999 107 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 Y_RNA.244-201ENST00000364484 109 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 Y_RNA.313-201ENST00000365095 103 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 RNU7-67P-201ENST00000459003 62 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 SNORD123-201ENST00000459473 70 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 Y_RNA.659-201ENST00000515994 113 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX1Q92499 MIR4668-201ENST00000582284 70 ntBASIC2.08□□□□□ -2.08
DDX1Q92499 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
DDX1Q92499 RNU6-1163P-201ENST00000364516 107 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 Y_RNA.537-201ENST00000384626 109 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
DDX1Q92499 U8.15-201ENST00000390947 134 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 AL512310.12-203ENST00000640543 90 ntBASIC2.07□□□□□ -2.08
DDX1Q92499 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
DDX1Q92499 SNORD116-10-201ENST00000363791 102 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 Y_RNA.221-201ENST00000364248 96 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 SNORA32-201ENST00000384072 121 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 MIR7-2-201ENST00000384970 110 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 RNU6-322P-201ENST00000516010 103 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 RNU7-2P-201ENST00000516096 62 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 RNU7-35P-201ENST00000517174 62 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 FAM106DP-201ENST00000586416 501 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 AC096720.1-201ENST00000604441 183 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 MIR376B-201ENST00000614515 100 ntBASIC2.06□□□□□ -2.08
DDX1Q92499 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX1Q92499 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 HMGN1P33-201ENST00000432945 451 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 MIR3198-2-201ENST00000577868 80 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 SEPT14P17-201ENST00000617978 177 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 MIR8065-201ENST00000620577 100 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 MIR8063-201ENST00000621930 81 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 AC006160.2-201ENST00000637708 154 ntBASIC2.05□□□□□ -2.08
DDX1Q92499 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
DDX1Q92499 RNU6-1125P-201ENST00000363601 107 ntBASIC2.04□□□□□ -2.08
DDX1Q92499 RNU6-342P-201ENST00000384521 104 ntBASIC2.04□□□□□ -2.08
DDX1Q92499 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
DDX1Q92499 HSPE1P24-201ENST00000450782 238 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 296.1 ms