Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR598-201ENST00000384868 97 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 RNU6-1110P-201ENST00000516462 101 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 MIR3121-201ENST00000579680 77 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 AL662814.1-201ENST00000617364 121 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 MIR1-1-201ENST00000362147 71 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 MT-TF-201ENST00000387314 71 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.692-201ENST00000516627 105 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 AP001328.1-201ENST00000528550 176 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 AC021443.1-201ENST00000604478 211 ntBASIC1□□□□□ -2.25
HMGB4Q8WW32 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HMGB4Q8WW32 SNORD115-2-201ENST00000362842 82 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 SNORD115-20-201ENST00000365099 82 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 RNU6-1237P-201ENST00000384777 107 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 RNU7-113P-201ENST00000459273 62 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 RNU6-426P-201ENST00000516464 97 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 MIR4771-2-201ENST00000577758 74 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 MIR4771-1-201ENST00000582617 74 ntBASIC0.99□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.366-201ENST00000365540 102 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.470-201ENST00000384307 117 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 SNORA18-201ENST00000384416 132 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 MIR100-201ENST00000385259 80 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 RNA5SP237-201ENST00000410414 113 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 AL512326.2-201ENST00000426359 151 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 AC015818.7-201ENST00000428754 109 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 AC087499.7-201ENST00000441958 109 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 RNU5E-3P-201ENST00000515913 68 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 RNU6-346P-201ENST00000516288 111 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 AC108081.1-201ENST00000604358 221 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 AL136317.1-201ENST00000612653 226 ntBASIC0.98□□□□□ -2.25
HMGB4Q8WW32 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGB4Q8WW32 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
HMGB4Q8WW32 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.531-201ENST00000384589 121 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 RNU7-164P-201ENST00000459221 62 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGB4Q8WW32 RNA5SP272-201ENST00000516095 111 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 AC004812.1-201ENST00000540773 146 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGB4Q8WW32 AC020891.4-201ENST00000605745 93 ntBASIC0.97□□□□□ -2.25
HMGB4Q8WW32 RNU6-1062P-201ENST00000383908 107 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 RNU7-123P-201ENST00000515911 60 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 MIR4676-201ENST00000583078 72 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 AL137067.1-201ENST00000615933 120 ntBASIC0.96□□□□□ -2.26
HMGB4Q8WW32 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMGB4Q8WW32 AC023934.1-201ENST00000574529 2389 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 SNORD114-26-201ENST00000363543 72 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.298-201ENST00000364960 107 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 RNU1-36P-201ENST00000365130 165 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.343-201ENST00000365354 112 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 RNU6-1086P-201ENST00000410930 100 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGB4Q8WW32 RNU7-185P-201ENST00000459215 60 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 RNA5SP33-201ENST00000516687 98 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 U7.2-201ENST00000607576 63 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.95□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.114-201ENST00000363265 113 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.280-201ENST00000364765 112 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.568-201ENST00000384742 113 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGB4Q8WW32 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 RNU7-35P-201ENST00000517174 62 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 MIR4804-201ENST00000581683 73 ntBASIC0.94□□□□□ -2.26
HMGB4Q8WW32 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.36-201ENST00000362602 112 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 Y_RNA.294-201ENST00000364916 102 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 RNY1P13-201ENST00000365030 105 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 MIR125B2-201ENST00000385128 89 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 SNORD105-201ENST00000386910 85 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 MIR1257-201ENST00000408490 117 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
HMGB4Q8WW32 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
HMGB4Q8WW32 RNU6-949P-201ENST00000384040 107 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 MIR520F-201ENST00000384824 87 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 MTND4LP9-201ENST00000427694 174 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 RNY4P20-201ENST00000516678 93 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 IGKV1-22-201ENST00000524313 326 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 MIR548AE2-201ENST00000583456 67 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
HMGB4Q8WW32 MIR6779-201ENST00000617283 64 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms