Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MIR4273-201ENST00000582824 84 ntBASIC-3.03□□□□□ -2.89
CFAP43Q8NDM7 RNU6-170P-201ENST00000362832 104 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 MIR516A2-201ENST00000384888 90 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 MIR516A1-201ENST00000385033 90 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 SNORD12B-201ENST00000410433 91 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 AL160004.2-201ENST00000432935 350 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 AC073415.1-201ENST00000449240 153 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 MIR4748-201ENST00000578076 82 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 MIR5583-1-201ENST00000580941 59 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 AL158211.2-201ENST00000607282 395 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 AC133104.2-201ENST00000615272 193 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 AC009161.2-201ENST00000624626 138 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 RNU6-888P-201ENST00000363010 101 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.162-201ENST00000363683 102 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 SNORD113-7-201ENST00000363762 77 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 RNU6-318P-201ENST00000384283 103 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 RNU7-137P-201ENST00000516788 62 ntBASIC-3.04□□□□□ -2.9
CFAP43Q8NDM7 RNU4-10P-201ENST00000364383 140 ntBASIC-3.05□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.05□□□□□ -2.9
CFAP43Q8NDM7 RNU6-126P-201ENST00000516685 103 ntBASIC-3.05□□□□□ -2.9
CFAP43Q8NDM7 RNU6-1270P-201ENST00000517128 108 ntBASIC-3.05□□□□□ -2.9
CFAP43Q8NDM7 MIR4662B-201ENST00000579498 81 ntBASIC-3.05□□□□□ -2.9
CFAP43Q8NDM7 MIR517A-201ENST00000385001 87 ntBASIC-3.06□□□□□ -2.9
CFAP43Q8NDM7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-3.06□□□□□ -2.9
CFAP43Q8NDM7 AL118558.2-201ENST00000556294 238 ntBASIC-3.06□□□□□ -2.9
CFAP43Q8NDM7 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 RNU6-522P-201ENST00000364497 107 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 RNU7-48P-201ENST00000458875 63 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-3.07□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.364-201ENST00000365532 101 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 RNU2-66P-201ENST00000410650 161 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 RNU6-155P-201ENST00000516347 100 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 AC006504.6-201ENST00000590142 199 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 AC108081.1-201ENST00000604358 221 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 MTND1P34-201ENST00000438556 671 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 RNU7-180P-201ENST00000459240 63 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 AC144568.1-201ENST00000520139 137 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 AC019193.3-201ENST00000609144 554 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 DLEU2_5.1-201ENST00000615567 84 ntBASIC-3.08□□□□□ -2.9
CFAP43Q8NDM7 RNY4P34-201ENST00000364779 95 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.481-201ENST00000384373 102 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 Y_RNA.515-201ENST00000384535 112 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 MIR3682-201ENST00000581338 84 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 AC084781.2-201ENST00000615568 161 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 AC099654.13-201ENST00000639774 207 ntBASIC-3.09□□□□□ -2.9
CFAP43Q8NDM7 RNU6-626P-201ENST00000363354 107 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 RNU6-1200P-201ENST00000384162 107 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.470-201ENST00000384307 117 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 RNU7-87P-201ENST00000459343 62 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 RNU6-762P-201ENST00000517107 102 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 AC092747.3-201ENST00000603769 301 ntBASIC-3.1□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.171-201ENST00000363760 102 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 RNU7-141P-201ENST00000459304 62 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 SNORA19.2-201ENST00000516013 114 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 RNU6-801P-201ENST00000364087 105 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 RNU6-144P-201ENST00000383951 107 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 MTATP6P19-201ENST00000413797 659 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 RNU7-113P-201ENST00000459273 62 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 AC091951.2-201ENST00000500762 203 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 CCDC34P1-201ENST00000507441 517 ntBASIC-3.11□□□□□ -2.91
CFAP43Q8NDM7 FGF7P2-201ENST00000332473 296 ntBASIC-3.12□□□□□ -2.91
CFAP43Q8NDM7 RNU6-664P-201ENST00000362381 107 ntBASIC-3.12□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.66-201ENST00000362862 102 ntBASIC-3.12□□□□□ -2.91
CFAP43Q8NDM7 AC024067.1-201ENST00000426199 223 ntBASIC-3.12□□□□□ -2.91
CFAP43Q8NDM7 AC024933.1-201ENST00000608472 348 ntBASIC-3.12□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 RNU5E-5P-201ENST00000365379 116 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 SNORA72.4-201ENST00000384174 132 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 RNU6-195P-201ENST00000411352 109 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 PMCHL1-202ENST00000423102 261 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 RNU7-70P-201ENST00000516941 66 ntBASIC-3.13□□□□□ -2.91
CFAP43Q8NDM7 RNU6-660P-201ENST00000364566 109 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.618-201ENST00000410949 107 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.98-201ENST00000363109 102 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 RNU6-181P-201ENST00000363225 107 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 SNORD77.4-201ENST00000516158 81 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 RNU6-850P-201ENST00000516934 103 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 RNU6-445P-201ENST00000516949 107 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 AP002795.1-201ENST00000534879 84 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 U6.100-201ENST00000636230 99 ntBASIC-3.14□□□□□ -2.91
CFAP43Q8NDM7 RNU6-1301P-201ENST00000362724 104 ntBASIC-3.15□□□□□ -2.91
CFAP43Q8NDM7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-3.15□□□□□ -2.91
CFAP43Q8NDM7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-3.15□□□□□ -2.91
CFAP43Q8NDM7 RNY4P9-201ENST00000363194 97 ntBASIC-3.16□□□□□ -2.92
CFAP43Q8NDM7 MIR4424-201ENST00000585257 86 ntBASIC-3.16□□□□□ -2.92
CFAP43Q8NDM7 Y_RNA.603-201ENST00000410571 108 ntBASIC-3.17□□□□□ -2.92
CFAP43Q8NDM7 RPL35AP4-201ENST00000412007 102 ntBASIC-3.17□□□□□ -2.92
CFAP43Q8NDM7 MIR2355-201ENST00000517199 87 ntBASIC-3.17□□□□□ -2.92
CFAP43Q8NDM7 MIR3123-201ENST00000583417 75 ntBASIC-3.17□□□□□ -2.92
CFAP43Q8NDM7 U6.96-201ENST00000636425 70 ntBASIC-3.17□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms