Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 RNU6-53P-201ENST00000365367 106 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 SNORA6-201ENST00000384033 151 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 RNU6-466P-201ENST00000391224 103 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 AC245517.4-201ENST00000448601 281 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 AC114801.3-201ENST00000510231 177 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
RETREG3Q86VR2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RETREG3Q86VR2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RETREG3Q86VR2 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
RETREG3Q86VR2 Y_RNA.283-201ENST00000364798 112 ntBASIC2.6□□□□□ -1.99
RETREG3Q86VR2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RETREG3Q86VR2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.6□□□□□ -1.99
RETREG3Q86VR2 SCARNA18B-201ENST00000458806 135 ntBASIC2.6□□□□□ -1.99
RETREG3Q86VR2 RNU6-531P-201ENST00000516694 104 ntBASIC2.6□□□□□ -1.99
RETREG3Q86VR2 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
RETREG3Q86VR2 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 MIR548U-201ENST00000390728 81 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 RNA5SP212-201ENST00000391223 107 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 COTL1P1-201ENST00000422309 375 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 AC055731.1-201ENST00000474387 401 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 RPL30P7-201ENST00000479312 323 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.59□□□□□ -1.99
RETREG3Q86VR2 AC104996.3-201ENST00000590718 94 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 uc_338.6-201ENST00000613544 171 ntBASIC2.59□□□□□ -1.99
RETREG3Q86VR2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RETREG3Q86VR2 RNU4-58P-201ENST00000363192 141 ntBASIC2.58□□□□□ -2
RETREG3Q86VR2 RNU6-132P-201ENST00000383863 107 ntBASIC2.58□□□□□ -2
RETREG3Q86VR2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.58□□□□□ -2
RETREG3Q86VR2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.58□□□□□ -2
RETREG3Q86VR2 MIR3134-201ENST00000579433 74 ntBASIC2.58□□□□□ -2
RETREG3Q86VR2 MIR3064-201ENST00000581130 66 ntBASIC2.58□□□□□ -2
RETREG3Q86VR2 SNORD92-201ENST00000585078 85 ntBASIC2.58□□□□□ -2
RETREG3Q86VR2 SNORD93-201ENST00000408813 74 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 RNU6-75P-201ENST00000515944 104 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 RNU6-523P-201ENST00000516304 54 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 SNORA25.16-201ENST00000516741 121 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 RNU6-250P-201ENST00000516958 103 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 MIR6516-201ENST00000630554 81 ntBASIC2.57□□□□□ -2
RETREG3Q86VR2 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RETREG3Q86VR2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RETREG3Q86VR2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RETREG3Q86VR2 Y_RNA.491-201ENST00000384417 107 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 RNU6-411P-201ENST00000384451 107 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
RETREG3Q86VR2 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 snoU13.25-201ENST00000458945 104 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 AC015688.6-201ENST00000577737 104 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 MIR4491-201ENST00000581087 68 ntBASIC2.56□□□□□ -2
RETREG3Q86VR2 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 SNORD77.2-201ENST00000391045 68 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 SNORD63B-201ENST00000411005 70 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RETREG3Q86VR2 RNU7-106P-201ENST00000459514 67 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 RNU6-807P-201ENST00000516805 107 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
RETREG3Q86VR2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
RETREG3Q86VR2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR377-201ENST00000362145 69 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR103A2-201ENST00000362154 78 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 RNU6-590P-201ENST00000365039 107 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR635-201ENST00000384830 98 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 SNORD23.1-201ENST00000408212 104 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 AL133373.1-201ENST00000497098 94 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 RNU11-2P-201ENST00000516898 142 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR4484-201ENST00000582855 83 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 AC006386.2-201ENST00000624491 75 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 AC012005.1-201ENST00000624575 75 ntBASIC2.54□□□□□ -2
RETREG3Q86VR2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
RETREG3Q86VR2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RETREG3Q86VR2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RETREG3Q86VR2 MIRLET7F1-201ENST00000362202 87 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 RNU6-403P-201ENST00000363163 104 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
RETREG3Q86VR2 SNORA40.18-201ENST00000391200 128 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 AC015818.7-201ENST00000428754 109 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
RETREG3Q86VR2 AL596028.1-201ENST00000326971 197 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 RNU6-957P-201ENST00000363652 99 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 RNU6-654P-201ENST00000364373 107 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 Y_RNA.264-201ENST00000364665 102 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 SNORA44-201ENST00000384584 132 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 Y_RNA.588-201ENST00000391254 102 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 AL138827.1-201ENST00000402666 306 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 MIR1185-1-201ENST00000408598 86 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 RNA5SP95-201ENST00000410319 137 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 RNU6-871P-201ENST00000516122 100 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 SNORA77B-201ENST00000578179 125 ntBASIC2.52□□□□□ -2.01
RETREG3Q86VR2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RETREG3Q86VR2 SNORA67.4-201ENST00000384688 142 ntBASIC2.51□□□□□ -2.01
RETREG3Q86VR2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms