Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RNU5E-9P-201ENST00000411164 104 ntBASIC0.45□□□□□ -2.34
CCDC30Q5VVM6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC30Q5VVM6 SCARNA15.1-201ENST00000516384 125 ntBASIC0.45□□□□□ -2.34
CCDC30Q5VVM6 MRPS18CP4-201ENST00000535821 231 ntBASIC0.45□□□□□ -2.34
CCDC30Q5VVM6 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 RNU6-949P-201ENST00000384040 107 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 Y_RNA.477-201ENST00000384352 108 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 SNORD71-201ENST00000411292 86 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 RNU6-765P-201ENST00000516916 99 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 MIR3128-201ENST00000581957 66 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.44□□□□□ -2.34
CCDC30Q5VVM6 U8.15-201ENST00000390947 134 ntBASIC0.43□□□□□ -2.34
CCDC30Q5VVM6 RNU6-679P-201ENST00000391003 106 ntBASIC0.43□□□□□ -2.34
CCDC30Q5VVM6 AL118496.2-201ENST00000448300 230 ntBASIC0.43□□□□□ -2.34
CCDC30Q5VVM6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 Y_RNA.193-201ENST00000363979 102 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 MIR4431-201ENST00000579990 94 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 MIR6082-201ENST00000613604 109 ntBASIC0.42□□□□□ -2.34
CCDC30Q5VVM6 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 SNORA20.1-201ENST00000364790 130 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 RNY1P6-201ENST00000384193 109 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 MTND3P2-201ENST00000438452 342 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 SNORA25.12-201ENST00000516202 82 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 RNU6-469P-201ENST00000516253 101 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 RNU6-135P-201ENST00000516769 101 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 MIR1273G-201ENST00000577677 100 ntBASIC0.41□□□□□ -2.34
CCDC30Q5VVM6 RNU6-702P-201ENST00000364982 107 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 SNORA18-201ENST00000384416 132 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.521-201ENST00000384560 114 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 RNU6-863P-201ENST00000515989 104 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.757-201ENST00000578934 114 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 U6.106-201ENST00000636360 105 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 MTND5P32-201ENST00000560711 1802 ntBASIC0.4□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.39□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.60-201ENST00000362831 98 ntBASIC0.39□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.39□□□□□ -2.35
CCDC30Q5VVM6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
CCDC30Q5VVM6 RNU6-918P-201ENST00000391219 106 ntBASIC0.39□□□□□ -2.35
CCDC30Q5VVM6 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.447-201ENST00000384184 113 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 AC096949.1-201ENST00000412047 152 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.680-201ENST00000516441 93 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 RNU6-111P-201ENST00000517179 105 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 MIR4491-201ENST00000581087 68 ntBASIC0.38□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.200-201ENST00000364018 102 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 RNU6-312P-201ENST00000364629 107 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.452-201ENST00000384202 108 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 RNU6-196P-201ENST00000384315 107 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 RNA5SP144-201ENST00000410846 116 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 AC022523.2-201ENST00000561045 150 ntBASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC30Q5VVM6 MIR411-201ENST00000362239 96 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.52-201ENST00000362760 96 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 RNU4-16P-201ENST00000364737 141 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 RNY1P13-201ENST00000365030 105 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 AL512326.2-201ENST00000426359 151 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 AC133485.4-201ENST00000561835 220 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 MIR4503-201ENST00000582187 83 ntBASIC0.36□□□□□ -2.35
CCDC30Q5VVM6 RNU6-349P-201ENST00000362402 107 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.83-201ENST00000363005 113 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 Y_RNA.617-201ENST00000410920 90 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 AC107027.2-201ENST00000512197 115 ntBASIC0.35□□□□□ -2.35
CCDC30Q5VVM6 SNORD115-2-201ENST00000362842 82 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 RNU6-1020P-201ENST00000363684 107 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 SNORD115-20-201ENST00000365099 82 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 AL022718.1-201ENST00000412004 84 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 RNA5SP236-201ENST00000516169 116 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 RNU7-35P-201ENST00000517174 62 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 AC011603.4-201ENST00000611325 277 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 MIR924-201ENST00000638017 53 ntBASIC0.34□□□□□ -2.36
CCDC30Q5VVM6 Y_RNA.307-201ENST00000365022 117 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 Y_RNA.337-201ENST00000365312 102 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 RNU7-79P-201ENST00000516082 62 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 MIR3149-201ENST00000584629 83 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 AC009779.6-201ENST00000603972 165 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.33□□□□□ -2.36
CCDC30Q5VVM6 Y_RNA.171-201ENST00000363760 102 ntBASIC0.32□□□□□ -2.36
CCDC30Q5VVM6 RNU6-768P-201ENST00000384683 107 ntBASIC0.32□□□□□ -2.36
CCDC30Q5VVM6 MTATP6P21-201ENST00000440681 189 ntBASIC0.32□□□□□ -2.36
CCDC30Q5VVM6 RNU7-113P-201ENST00000459273 62 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms