Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RPS29P28-201ENST00000446439 141 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 AC067940.1-201ENST00000458411 300 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 RNU2-35P-201ENST00000516446 142 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 AC133485.4-201ENST00000561835 220 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 AC138907.4-201ENST00000570107 226 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 MIR4305-201ENST00000583252 102 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 MIR6740-201ENST00000618268 113 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
KRTCAP3Q53RY4 MIR613-201ENST00000385248 95 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 SNORA40-201ENST00000388090 126 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 Y_RNA.586-201ENST00000391146 98 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 MIR548J-201ENST00000408833 112 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 AL512326.2-201ENST00000426359 151 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 snoU13.2-201ENST00000459201 104 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 snoU13.21-201ENST00000459368 105 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 IGKV1-22-201ENST00000524313 326 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 AC021443.1-201ENST00000604478 211 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 U7.2-201ENST00000607576 63 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 uc_338.6-201ENST00000613544 171 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.92□□□□□ -2.26
KRTCAP3Q53RY4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 SNORD50.2-201ENST00000365465 70 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 MIR588-201ENST00000384900 83 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 AL158147.1-201ENST00000443970 75 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 RNU6-893P-201ENST00000458841 100 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 MIR6515-201ENST00000619843 57 ntBASIC0.91□□□□□ -2.26
KRTCAP3Q53RY4 RNU6-704P-201ENST00000364162 103 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 RNU7-164P-201ENST00000459221 62 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 AL137067.1-201ENST00000615933 120 ntBASIC0.9□□□□□ -2.27
KRTCAP3Q53RY4 Y_RNA.531-201ENST00000384589 121 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 AL022718.1-201ENST00000412004 84 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1211P-201ENST00000459179 105 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 RNU7-113P-201ENST00000459273 62 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 RNU7-123P-201ENST00000515911 60 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 RN7SKP19-201ENST00000516016 252 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 AC004812.1-201ENST00000540773 146 ntBASIC0.89□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-235P-201ENST00000362644 107 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-934P-201ENST00000365154 107 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-342P-201ENST00000384521 104 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 U7.7-201ENST00000459276 60 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-971P-201ENST00000516920 106 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 AL136317.1-201ENST00000612653 226 ntBASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTCAP3Q53RY4 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 MIR30D-201ENST00000362283 70 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 SNORD115-2-201ENST00000362842 82 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-647P-201ENST00000364243 107 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 SNORD115-20-201ENST00000365099 82 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 SNORA18-201ENST00000384416 132 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 AL603908.1-201ENST00000406098 201 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 SNORD83.1-201ENST00000411362 77 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-781P-201ENST00000516377 101 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 RNY4P20-201ENST00000516678 93 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
KRTCAP3Q53RY4 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 MIR1827-201ENST00000408549 66 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 RNA5SP237-201ENST00000410414 113 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 AC015818.7-201ENST00000428754 109 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 AC087499.7-201ENST00000441958 109 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 MIR18B-201ENST00000454574 71 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 RNA5SP33-201ENST00000516687 98 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 AC022523.2-201ENST00000561045 150 ntBASIC0.86□□□□□ -2.27
KRTCAP3Q53RY4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-369P-201ENST00000362515 102 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MIR539-201ENST00000365690 78 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MT-TF-201ENST00000387314 71 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 RPS26P5-201ENST00000418544 335 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MIR4771-2-201ENST00000577758 74 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MIR4771-1-201ENST00000582617 74 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 AL662814.1-201ENST00000617364 121 ntBASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTCAP3Q53RY4 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 MT-TI-201ENST00000387365 69 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms