Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC132825.6-201ENST00000638861 357 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 SNORA18-201ENST00000384416 132 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 MIR320A-201ENST00000385302 82 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 RNU6-1165P-201ENST00000410119 107 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 RNU4-61P-201ENST00000411243 107 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 RPL39P25-201ENST00000449384 154 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 MIR6740-201ENST00000618268 113 ntBASIC1.25□□□□□ -2.21
NKX6-1P78426 Y_RNA.213-201ENST00000364178 111 ntBASIC1.24□□□□□ -2.21
NKX6-1P78426 MIR200A-201ENST00000384875 90 ntBASIC1.24□□□□□ -2.21
NKX6-1P78426 MIR18B-201ENST00000454574 71 ntBASIC1.24□□□□□ -2.21
NKX6-1P78426 IGKV1-22-201ENST00000524313 326 ntBASIC1.24□□□□□ -2.21
NKX6-1P78426 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.24□□□□□ -2.21
NKX6-1P78426 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NKX6-1P78426 Y_RNA.71-201ENST00000362892 104 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 Y_RNA.470-201ENST00000384307 117 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 Y_RNA.528-201ENST00000384575 108 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 RNU6-959P-201ENST00000384671 107 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 MT-TF-201ENST00000387314 71 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 FABP5P4-201ENST00000437203 171 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 AL662814.1-201ENST00000617364 121 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 MIR6515-201ENST00000619843 57 ntBASIC1.23□□□□□ -2.21
NKX6-1P78426 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 SNORD58C-201ENST00000365223 64 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 Y_RNA.346-201ENST00000365385 112 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 MIR563-201ENST00000385080 79 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 RNU4-69P-201ENST00000410677 143 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 RNU6-1086P-201ENST00000410930 100 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 COX6CP6-201ENST00000490840 228 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 RNU6-1234P-201ENST00000516877 103 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 AC025166.1-201ENST00000612411 163 ntBASIC1.22□□□□□ -2.21
NKX6-1P78426 Y_RNA.36-201ENST00000362602 112 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 Y_RNA.198-201ENST00000364013 98 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 Y_RNA.218-201ENST00000364218 104 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 RNU6-342P-201ENST00000384521 104 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 SNORD77B-201ENST00000391112 67 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 RNU6-772P-201ENST00000516042 105 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 RNU6-781P-201ENST00000516377 101 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 RNU6-94P-201ENST00000607728 107 ntBASIC1.21□□□□□ -2.22
NKX6-1P78426 AL157777.2-201ENST00000258070 137 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 Y_RNA.374-201ENST00000365606 101 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORD116-14-201ENST00000383894 92 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORD116-17-201ENST00000383929 92 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORA32-201ENST00000384072 121 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORD116-15-201ENST00000384445 92 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 SNORD116-19-201ENST00000384729 92 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 RNU7-79P-201ENST00000516082 62 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 AC141846.1-201ENST00000568348 142 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 MIR548AE2-201ENST00000583456 67 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 AL136317.1-201ENST00000612653 226 ntBASIC1.2□□□□□ -2.22
NKX6-1P78426 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
NKX6-1P78426 MIR1-1-201ENST00000362147 71 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 RNU6-1117P-201ENST00000384525 104 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 MIR942-201ENST00000401111 86 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 AC008267.6-201ENST00000441664 139 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 RNU6-62P-201ENST00000516526 102 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 RNU7-35P-201ENST00000517174 62 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 MIR3163-201ENST00000581592 73 ntBASIC1.19□□□□□ -2.22
NKX6-1P78426 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 RNU7-107P-201ENST00000459121 61 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 AC022523.2-201ENST00000561045 150 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 AC022709.1-201ENST00000615967 87 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 PVT1_3.1-201ENST00000620853 95 ntBASIC1.18□□□□□ -2.22
NKX6-1P78426 MIR30D-201ENST00000362283 70 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 Y_RNA.127-201ENST00000363386 109 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 RNU6-1104P-201ENST00000384723 104 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 RNU6-659P-201ENST00000516454 104 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 MIR4771-2-201ENST00000577758 74 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 MIR4771-1-201ENST00000582617 74 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 MTND5P18-201ENST00000445624 1801 ntBASIC1.17□□□□□ -2.22
NKX6-1P78426 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX6-1P78426 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 RNU6-949P-201ENST00000384040 107 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 MIRLET7F2-201ENST00000385277 83 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 RNU6-1333P-201ENST00000516162 93 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 RNU7-6P-201ENST00000516845 62 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 Y_RNA.712-201ENST00000517011 92 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 uc_338.6-201ENST00000613544 171 ntBASIC1.16□□□□□ -2.22
NKX6-1P78426 Y_RNA.205-201ENST00000364128 113 ntBASIC1.15□□□□□ -2.23
NKX6-1P78426 RNY1P13-201ENST00000365030 105 ntBASIC1.15□□□□□ -2.23
NKX6-1P78426 MIR1257-201ENST00000408490 117 ntBASIC1.15□□□□□ -2.23
NKX6-1P78426 RNA5SP61-201ENST00000516453 100 ntBASIC1.15□□□□□ -2.23
NKX6-1P78426 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms