Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC133104.2-201ENST00000615272 193 ntBASIC-1.77□□□□□ -2.69
TPM4P67936 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 RNU7-55P-201ENST00000459426 62 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 RNU6-138P-201ENST00000515952 107 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 uc_338.19-201ENST00000616808 99 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 AC048344.4-201ENST00000619744 527 ntBASIC-1.78□□□□□ -2.69
TPM4P67936 MIR617-201ENST00000385030 97 ntBASIC-1.79□□□□□ -2.7
TPM4P67936 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.79□□□□□ -2.7
TPM4P67936 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.79□□□□□ -2.7
TPM4P67936 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.79□□□□□ -2.7
TPM4P67936 MIR548AG2-201ENST00000581228 64 ntBASIC-1.79□□□□□ -2.7
TPM4P67936 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.79□□□□□ -2.7
TPM4P67936 MIR4272-201ENST00000635924 64 ntBASIC-1.79□□□□□ -2.7
TPM4P67936 MIR20A-201ENST00000362279 71 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 SNORA32-201ENST00000384072 121 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 RNU6-507P-201ENST00000516045 100 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 MIR4460-201ENST00000577862 86 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 U4.1-201ENST00000620349 87 ntBASIC-1.8□□□□□ -2.7
TPM4P67936 RNU4-10P-201ENST00000364383 140 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 MIR517B-201ENST00000385102 67 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 RNU6-370P-201ENST00000411008 104 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 SNORD22.1-201ENST00000516331 125 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 MIR5690-201ENST00000583739 73 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 AC006006.1-201ENST00000603082 144 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 AC011603.4-201ENST00000611325 277 ntBASIC-1.81□□□□□ -2.7
TPM4P67936 MIR518B-201ENST00000385127 83 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 MIR548I2-201ENST00000408348 149 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 SNRPGP8-201ENST00000454064 226 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.82□□□□□ -2.7
TPM4P67936 RNU7-195P-201ENST00000458793 62 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 RNU7-113P-201ENST00000459273 62 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 U8.20-201ENST00000459445 131 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 RNA5SP33-201ENST00000516687 98 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 IGKV1-22-201ENST00000524313 326 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 MIR4500-201ENST00000579472 76 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 RPS29P30-201ENST00000600975 111 ntBASIC-1.82□□□□□ -2.7
TPM4P67936 SNORD115-2-201ENST00000362842 82 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 SNORD115-20-201ENST00000365099 82 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 RNU6-524P-201ENST00000384270 107 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 MIR559-201ENST00000385188 96 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 SNORA49-201ENST00000386157 136 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 MIR4760-201ENST00000585040 80 ntBASIC-1.83□□□□□ -2.7
TPM4P67936 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 RNY3P5-201ENST00000384127 102 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
TPM4P67936 RNA5SP144-201ENST00000410846 116 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.84□□□□□ -2.7
TPM4P67936 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.84□□□□□ -2.7
TPM4P67936 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.85□□□□□ -2.71
TPM4P67936 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.85□□□□□ -2.71
TPM4P67936 AC098614.3-201ENST00000438957 440 ntBASIC-1.85□□□□□ -2.71
TPM4P67936 AL365205.2-201ENST00000594586 68 ntBASIC-1.85□□□□□ -2.71
TPM4P67936 AL008718.3-201ENST00000610217 321 ntBASIC-1.85□□□□□ -2.71
TPM4P67936 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 SNORD63B-201ENST00000411005 70 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 AC244090.1-201ENST00000441884 93 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 RNU6-274P-201ENST00000459566 107 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 AC022137.1-201ENST00000483735 151 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 AC006504.6-201ENST00000590142 199 ntBASIC-1.86□□□□□ -2.71
TPM4P67936 RNU6-431P-201ENST00000383874 107 ntBASIC-1.87□□□□□ -2.71
TPM4P67936 RNU6-570P-201ENST00000517051 105 ntBASIC-1.87□□□□□ -2.71
TPM4P67936 RNU6-699P-201ENST00000517081 110 ntBASIC-1.87□□□□□ -2.71
TPM4P67936 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.87□□□□□ -2.71
TPM4P67936 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 SNORD64-201ENST00000386683 67 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 AP000533.3-201ENST00000447704 118 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.88□□□□□ -2.71
TPM4P67936 SCARNA18B-201ENST00000458806 135 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 MTND4P17-201ENST00000470444 350 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 RNU6-358P-201ENST00000516564 75 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 AC245505.1-201ENST00000556398 224 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 MIR5704-201ENST00000584029 77 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.88□□□□□ -2.71
TPM4P67936 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 MT-TY-201ENST00000387409 66 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 AL731563.1-201ENST00000442202 214 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 SCARNA15-202ENST00000516881 127 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 MIR378F-201ENST00000578143 78 ntBASIC-1.89□□□□□ -2.71
TPM4P67936 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 MIR1265-201ENST00000408444 86 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 MTATP6P23-201ENST00000440153 476 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 HSPE1P25-201ENST00000455484 251 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 RNA5SP470-201ENST00000516463 106 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms