Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC090844.1-201ENST00000422019 156 ntBASIC1.08□□□□□ -2.24
LMO4P61968 RNU6-893P-201ENST00000458841 100 ntBASIC1.08□□□□□ -2.24
LMO4P61968 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
LMO4P61968 SNORD111.1-201ENST00000516421 86 ntBASIC1.08□□□□□ -2.24
LMO4P61968 RNA5SP61-201ENST00000516453 100 ntBASIC1.08□□□□□ -2.24
LMO4P61968 MIR5009-201ENST00000578736 100 ntBASIC1.08□□□□□ -2.24
LMO4P61968 Y_RNA.773-201ENST00000607168 90 ntBASIC1.08□□□□□ -2.24
LMO4P61968 MIR8055-201ENST00000610739 97 ntBASIC1.08□□□□□ -2.24
LMO4P61968 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
LMO4P61968 MIR4251-201ENST00000635819 61 ntBASIC1.08□□□□□ -2.24
LMO4P61968 MIR1255B1-201ENST00000636325 63 ntBASIC1.08□□□□□ -2.24
LMO4P61968 AL162726.3-218ENST00000636401 95 ntBASIC1.08□□□□□ -2.24
LMO4P61968 RNU6-766P-201ENST00000362478 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 SNORD115-19-201ENST00000363098 82 ntBASIC1.07□□□□□ -2.24
LMO4P61968 SNORD115-18-201ENST00000363293 82 ntBASIC1.07□□□□□ -2.24
LMO4P61968 SNORD115-17-201ENST00000364612 82 ntBASIC1.07□□□□□ -2.24
LMO4P61968 SNORA1.1-201ENST00000364671 133 ntBASIC1.07□□□□□ -2.24
LMO4P61968 Y_RNA.309-201ENST00000365046 111 ntBASIC1.07□□□□□ -2.24
LMO4P61968 Y_RNA.328-201ENST00000365208 113 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-32P-201ENST00000383948 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-756P-201ENST00000383997 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-13P-201ENST00000384248 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-12P-201ENST00000384604 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-41P-201ENST00000384741 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-816P-201ENST00000390914 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-1268P-201ENST00000391214 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU6-1239P-201ENST00000391310 107 ntBASIC1.07□□□□□ -2.24
LMO4P61968 MIR1302-5-201ENST00000408164 150 ntBASIC1.07□□□□□ -2.24
LMO4P61968 MIR1276-201ENST00000408707 83 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNU4-69P-201ENST00000410677 143 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RPS3AP1-201ENST00000413190 320 ntBASIC1.07□□□□□ -2.24
LMO4P61968 snoU13.25-201ENST00000458945 104 ntBASIC1.07□□□□□ -2.24
LMO4P61968 RNA5SP33-201ENST00000516687 98 ntBASIC1.07□□□□□ -2.24
LMO4P61968 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.07□□□□□ -2.24
LMO4P61968 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
LMO4P61968 MIR548AO-201ENST00000579992 96 ntBASIC1.07□□□□□ -2.24
LMO4P61968 MIR8065-201ENST00000620577 100 ntBASIC1.07□□□□□ -2.24
LMO4P61968 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
LMO4P61968 Y_RNA.299-201ENST00000364973 94 ntBASIC1.06□□□□□ -2.24
LMO4P61968 SNORA32-201ENST00000384072 121 ntBASIC1.06□□□□□ -2.24
LMO4P61968 SNORA51.5-201ENST00000384126 131 ntBASIC1.06□□□□□ -2.24
LMO4P61968 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
LMO4P61968 SNORA19.1-201ENST00000410656 129 ntBASIC1.06□□□□□ -2.24
LMO4P61968 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.06□□□□□ -2.24
LMO4P61968 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.06□□□□□ -2.24
LMO4P61968 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
LMO4P61968 RNU6-537P-201ENST00000517277 103 ntBASIC1.06□□□□□ -2.24
LMO4P61968 MIR3192-201ENST00000584920 77 ntBASIC1.06□□□□□ -2.24
LMO4P61968 AL096861.1-201ENST00000610899 123 ntBASIC1.06□□□□□ -2.24
LMO4P61968 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
LMO4P61968 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
LMO4P61968 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
LMO4P61968 RNU6-342P-201ENST00000384521 104 ntBASIC1.05□□□□□ -2.24
LMO4P61968 MIR758-201ENST00000390227 88 ntBASIC1.05□□□□□ -2.24
LMO4P61968 RNU6-602P-201ENST00000411155 105 ntBASIC1.05□□□□□ -2.24
LMO4P61968 RPL39P25-201ENST00000449384 154 ntBASIC1.05□□□□□ -2.24
LMO4P61968 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
LMO4P61968 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LMO4P61968 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LMO4P61968 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
LMO4P61968 RNA5SP48-201ENST00000363969 126 ntBASIC1.04□□□□□ -2.24
LMO4P61968 RNU6-616P-201ENST00000384353 107 ntBASIC1.04□□□□□ -2.24
LMO4P61968 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
LMO4P61968 MIR1302-7-201ENST00000408841 72 ntBASIC1.04□□□□□ -2.24
LMO4P61968 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.04□□□□□ -2.24
LMO4P61968 AC245047.7-201ENST00000440265 293 ntBASIC1.04□□□□□ -2.24
LMO4P61968 AL353813.1-201ENST00000440700 253 ntBASIC1.04□□□□□ -2.24
LMO4P61968 Y_RNA.677-201ENST00000516401 85 ntBASIC1.04□□□□□ -2.24
LMO4P61968 RNA5SP102-201ENST00000516865 106 ntBASIC1.04□□□□□ -2.24
LMO4P61968 RNA5SP170-201ENST00000517150 101 ntBASIC1.04□□□□□ -2.24
LMO4P61968 AC141557.1-201ENST00000540982 400 ntBASIC1.04□□□□□ -2.24
LMO4P61968 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
LMO4P61968 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
LMO4P61968 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
LMO4P61968 RNU4-67P-201ENST00000364569 141 ntBASIC1.03□□□□□ -2.24
LMO4P61968 Y_RNA.348-201ENST00000365403 103 ntBASIC1.03□□□□□ -2.24
LMO4P61968 MIR590-201ENST00000385008 97 ntBASIC1.03□□□□□ -2.24
LMO4P61968 SNORD77B-201ENST00000391112 67 ntBASIC1.03□□□□□ -2.24
LMO4P61968 MIR1912-201ENST00000410389 80 ntBASIC1.03□□□□□ -2.24
LMO4P61968 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
LMO4P61968 RNU6-109P-201ENST00000516364 107 ntBASIC1.03□□□□□ -2.24
LMO4P61968 RNU6-184P-201ENST00000516514 107 ntBASIC1.03□□□□□ -2.24
LMO4P61968 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
LMO4P61968 MIR3664-201ENST00000579074 99 ntBASIC1.03□□□□□ -2.24
LMO4P61968 GHRLOS.1-201ENST00000610995 70 ntBASIC1.03□□□□□ -2.24
LMO4P61968 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
LMO4P61968 RNU6-363P-201ENST00000362895 105 ntBASIC1.02□□□□□ -2.25
LMO4P61968 Y_RNA.155-201ENST00000363632 101 ntBASIC1.02□□□□□ -2.25
LMO4P61968 RNU6-640P-201ENST00000363693 105 ntBASIC1.02□□□□□ -2.25
LMO4P61968 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
LMO4P61968 SNORA18-201ENST00000384416 132 ntBASIC1.02□□□□□ -2.25
LMO4P61968 RNU6-905P-201ENST00000384434 107 ntBASIC1.02□□□□□ -2.25
LMO4P61968 Y_RNA.507-201ENST00000384500 99 ntBASIC1.02□□□□□ -2.25
LMO4P61968 MIR605-201ENST00000385078 83 ntBASIC1.02□□□□□ -2.25
LMO4P61968 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LMO4P61968 RNU6-904P-201ENST00000516206 101 ntBASIC1.02□□□□□ -2.25
LMO4P61968 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
LMO4P61968 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
LMO4P61968 AP001318.4-201ENST00000616637 121 ntBASIC1.02□□□□□ -2.25
LMO4P61968 Y_RNA.43-201ENST00000362670 111 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms