Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-978P-201ENST00000364371 103 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNY1P13-201ENST00000365030 105 ntBASIC0.03□□□□□ -2.4
SRP54P61011 SNORA18-201ENST00000384416 132 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-1086P-201ENST00000410930 100 ntBASIC0.03□□□□□ -2.4
SRP54P61011 SUMO1P3-201ENST00000439961 304 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
SRP54P61011 MTND5P34-201ENST00000568888 325 ntBASIC0.03□□□□□ -2.4
SRP54P61011 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
SRP54P61011 MIR4639-201ENST00000584938 69 ntBASIC0.03□□□□□ -2.4
SRP54P61011 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
SRP54P61011 AC044792.1-201ENST00000593294 196 ntBASIC0.03□□□□□ -2.4
SRP54P61011 AC091304.10-201ENST00000641554 121 ntBASIC0.03□□□□□ -2.4
SRP54P61011 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
SRP54P61011 RNU6-187P-201ENST00000384139 106 ntBASIC0.02□□□□□ -2.41
SRP54P61011 Y_RNA.539-201ENST00000384635 107 ntBASIC0.02□□□□□ -2.41
SRP54P61011 MT-TW-201ENST00000387382 68 ntBASIC0.02□□□□□ -2.41
SRP54P61011 MIR1302-6-201ENST00000408466 90 ntBASIC0.02□□□□□ -2.41
SRP54P61011 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
SRP54P61011 SNORA25.16-201ENST00000516741 121 ntBASIC0.02□□□□□ -2.41
SRP54P61011 MIR4744-201ENST00000581563 82 ntBASIC0.02□□□□□ -2.41
SRP54P61011 MIR8062-201ENST00000621515 85 ntBASIC0.02□□□□□ -2.41
SRP54P61011 RNU6-797P-201ENST00000363101 109 ntBASIC0.01□□□□□ -2.41
SRP54P61011 SNORD28-201ENST00000384706 75 ntBASIC0.01□□□□□ -2.41
SRP54P61011 RNU6-535P-201ENST00000384722 107 ntBASIC0.01□□□□□ -2.41
SRP54P61011 MIR624-201ENST00000385217 97 ntBASIC0.01□□□□□ -2.41
SRP54P61011 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
SRP54P61011 AL121914.1-201ENST00000450188 156 ntBASIC0.01□□□□□ -2.41
SRP54P61011 Y_RNA.697-201ENST00000516776 113 ntBASIC0.01□□□□□ -2.41
SRP54P61011 Y_RNA.701-201ENST00000516812 110 ntBASIC0.01□□□□□ -2.41
SRP54P61011 MIR378D2-201ENST00000580636 98 ntBASIC0.01□□□□□ -2.41
SRP54P61011 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
SRP54P61011 Y_RNA.352-201ENST00000365439 102 ntBASIC0□□□□□ -2.41
SRP54P61011 Y_RNA.483-201ENST00000384380 101 ntBASIC0□□□□□ -2.41
SRP54P61011 RNU6-1194P-201ENST00000516208 104 ntBASIC0□□□□□ -2.41
SRP54P61011 RNU6-635P-201ENST00000516651 102 ntBASIC0□□□□□ -2.41
SRP54P61011 MTND5P32-201ENST00000560711 1802 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 RNU4-16P-201ENST00000364737 141 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 RNU6-472P-201ENST00000384299 107 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 AP003072.1-201ENST00000531740 145 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 RNU1-29P-201ENST00000606574 126 ntBASIC-0.01□□□□□ -2.41
SRP54P61011 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 AC244669.1-204ENST00000621564 178 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 AC067863.3-201ENST00000624172 122 ntBASIC-0.02□□□□□ -2.41
SRP54P61011 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.03□□□□□ -2.41
SRP54P61011 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
SRP54P61011 RNU6-578P-201ENST00000390980 103 ntBASIC-0.03□□□□□ -2.41
SRP54P61011 MTATP8P1-201ENST00000467115 207 ntBASIC-0.03□□□□□ -2.41
SRP54P61011 RNY3P16-201ENST00000516338 101 ntBASIC-0.03□□□□□ -2.41
SRP54P61011 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.03□□□□□ -2.41
SRP54P61011 SNORA2A-201ENST00000383885 135 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 RNU6-531P-201ENST00000516694 104 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 RNU7-35P-201ENST00000517174 62 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 MIR4752-201ENST00000579672 72 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
SRP54P61011 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 RNU4-58P-201ENST00000363192 141 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 RNY1P6-201ENST00000384193 109 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 RNU7-79P-201ENST00000516082 62 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
SRP54P61011 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 SNORA63.5-201ENST00000363548 123 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 RNU4-70P-201ENST00000384579 139 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 RNA5SP144-201ENST00000410846 116 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 AC108059.2-201ENST00000434626 151 ntBASIC-0.06□□□□□ -2.42
SRP54P61011 RNU6-238P-201ENST00000363313 106 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 SNORA25.7-201ENST00000364375 127 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms