Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC090897.1-201ENST00000580909 226 ntBASIC0.43□□□□□ -2.34
VCPP55072 SNORD92-201ENST00000585078 85 ntBASIC0.43□□□□□ -2.34
VCPP55072 AC008608.1-201ENST00000603910 127 ntBASIC0.43□□□□□ -2.34
VCPP55072 AL162730.1-201ENST00000605734 292 ntBASIC0.43□□□□□ -2.34
VCPP55072 RNU2-4P-201ENST00000606190 192 ntBASIC0.43□□□□□ -2.34
VCPP55072 MIR6718-201ENST00000616153 80 ntBASIC0.43□□□□□ -2.34
VCPP55072 Y_RNA.65-201ENST00000362846 100 ntBASIC0.42□□□□□ -2.34
VCPP55072 Y_RNA.121-201ENST00000363309 113 ntBASIC0.42□□□□□ -2.34
VCPP55072 MIR568-201ENST00000385036 95 ntBASIC0.42□□□□□ -2.34
VCPP55072 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
VCPP55072 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
VCPP55072 MTND2P23-201ENST00000422990 651 ntBASIC0.42□□□□□ -2.34
VCPP55072 Y_RNA.797-201ENST00000515977 94 ntBASIC0.42□□□□□ -2.34
VCPP55072 RNU7-70P-201ENST00000516941 66 ntBASIC0.42□□□□□ -2.34
VCPP55072 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.42□□□□□ -2.34
VCPP55072 RNA5SP98-201ENST00000363158 137 ntBASIC0.41□□□□□ -2.34
VCPP55072 RNU6-923P-201ENST00000364753 107 ntBASIC0.41□□□□□ -2.34
VCPP55072 Y_RNA.539-201ENST00000384635 107 ntBASIC0.41□□□□□ -2.34
VCPP55072 SNORD58.1-201ENST00000391313 66 ntBASIC0.41□□□□□ -2.34
VCPP55072 Y_RNA.668-201ENST00000516233 93 ntBASIC0.41□□□□□ -2.34
VCPP55072 Y_RNA.20-201ENST00000362479 113 ntBASIC0.4□□□□□ -2.35
VCPP55072 Y_RNA.185-201ENST00000363894 100 ntBASIC0.4□□□□□ -2.35
VCPP55072 SNORD114-15-201ENST00000364687 72 ntBASIC0.4□□□□□ -2.35
VCPP55072 RNU6-597P-201ENST00000365620 102 ntBASIC0.4□□□□□ -2.35
VCPP55072 Y_RNA.477-201ENST00000384352 108 ntBASIC0.4□□□□□ -2.35
VCPP55072 SNORA20-201ENST00000384662 132 ntBASIC0.4□□□□□ -2.35
VCPP55072 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
VCPP55072 Y_RNA.626-201ENST00000411288 95 ntBASIC0.4□□□□□ -2.35
VCPP55072 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
VCPP55072 AL662814.1-201ENST00000617364 121 ntBASIC0.4□□□□□ -2.35
VCPP55072 Y_RNA.350-201ENST00000365409 98 ntBASIC0.39□□□□□ -2.35
VCPP55072 Y_RNA.478-201ENST00000384358 107 ntBASIC0.39□□□□□ -2.35
VCPP55072 Y_RNA.571-201ENST00000384753 98 ntBASIC0.39□□□□□ -2.35
VCPP55072 MIR624-201ENST00000385217 97 ntBASIC0.39□□□□□ -2.35
VCPP55072 SNORD93-201ENST00000408813 74 ntBASIC0.39□□□□□ -2.35
VCPP55072 SCARNA15-202ENST00000516881 127 ntBASIC0.39□□□□□ -2.35
VCPP55072 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
VCPP55072 MIR4308-201ENST00000580634 81 ntBASIC0.39□□□□□ -2.35
VCPP55072 MIR4305-201ENST00000583252 102 ntBASIC0.39□□□□□ -2.35
VCPP55072 AC021613.1-201ENST00000623880 111 ntBASIC0.39□□□□□ -2.35
VCPP55072 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
VCPP55072 Y_RNA.162-201ENST00000363683 102 ntBASIC0.38□□□□□ -2.35
VCPP55072 Y_RNA.182-201ENST00000363880 111 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6-643P-201ENST00000384018 107 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.38□□□□□ -2.35
VCPP55072 RPL39P25-201ENST00000449384 154 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6-758P-201ENST00000516292 89 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6-1045P-201ENST00000516321 107 ntBASIC0.38□□□□□ -2.35
VCPP55072 SCARNA15.1-201ENST00000516384 125 ntBASIC0.38□□□□□ -2.35
VCPP55072 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
VCPP55072 AC062037.2-201ENST00000610137 73 ntBASIC0.38□□□□□ -2.35
VCPP55072 MIR6841-201ENST00000637129 72 ntBASIC0.38□□□□□ -2.35
VCPP55072 SNORA22.1-201ENST00000362701 134 ntBASIC0.37□□□□□ -2.35
VCPP55072 RNU4-70P-201ENST00000384579 139 ntBASIC0.37□□□□□ -2.35
VCPP55072 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
VCPP55072 RNU6-1149P-201ENST00000516810 97 ntBASIC0.37□□□□□ -2.35
VCPP55072 MIR3128-201ENST00000581957 66 ntBASIC0.37□□□□□ -2.35
VCPP55072 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
VCPP55072 RNU6-275P-201ENST00000364910 107 ntBASIC0.36□□□□□ -2.35
VCPP55072 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
VCPP55072 AL022718.1-201ENST00000412004 84 ntBASIC0.36□□□□□ -2.35
VCPP55072 AL118496.2-201ENST00000448300 230 ntBASIC0.36□□□□□ -2.35
VCPP55072 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
VCPP55072 RNU4-71P-201ENST00000516258 113 ntBASIC0.36□□□□□ -2.35
VCPP55072 MIR8066-201ENST00000617280 78 ntBASIC0.36□□□□□ -2.35
VCPP55072 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
VCPP55072 RNA5SP368-201ENST00000364298 116 ntBASIC0.35□□□□□ -2.35
VCPP55072 SNORA25.7-201ENST00000364375 127 ntBASIC0.35□□□□□ -2.35
VCPP55072 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
VCPP55072 MRPS18CP4-201ENST00000535821 231 ntBASIC0.35□□□□□ -2.35
VCPP55072 AC141846.1-201ENST00000568348 142 ntBASIC0.35□□□□□ -2.35
VCPP55072 U4.1-201ENST00000620349 87 ntBASIC0.35□□□□□ -2.35
VCPP55072 MIR409-201ENST00000362237 79 ntBASIC0.34□□□□□ -2.36
VCPP55072 SNORA9.1-201ENST00000362412 131 ntBASIC0.34□□□□□ -2.36
VCPP55072 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
VCPP55072 Y_RNA.515-201ENST00000384535 112 ntBASIC0.34□□□□□ -2.36
VCPP55072 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
VCPP55072 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.34□□□□□ -2.36
VCPP55072 RNU6-893P-201ENST00000458841 100 ntBASIC0.34□□□□□ -2.36
VCPP55072 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.34□□□□□ -2.36
VCPP55072 RNU6-1023P-201ENST00000516137 106 ntBASIC0.34□□□□□ -2.36
VCPP55072 RNA5SP67-201ENST00000516422 131 ntBASIC0.34□□□□□ -2.36
VCPP55072 Y_RNA.680-201ENST00000516441 93 ntBASIC0.34□□□□□ -2.36
VCPP55072 RNA5SP94-201ENST00000516917 108 ntBASIC0.34□□□□□ -2.36
VCPP55072 MIR3678-201ENST00000578455 94 ntBASIC0.34□□□□□ -2.36
VCPP55072 MIR5190-201ENST00000581537 80 ntBASIC0.34□□□□□ -2.36
VCPP55072 U6.106-201ENST00000636360 105 ntBASIC0.34□□□□□ -2.36
VCPP55072 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
VCPP55072 Y_RNA.75-201ENST00000362927 97 ntBASIC0.33□□□□□ -2.36
VCPP55072 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
VCPP55072 RNU4-16P-201ENST00000364737 141 ntBASIC0.33□□□□□ -2.36
VCPP55072 SNORA20.1-201ENST00000364790 130 ntBASIC0.33□□□□□ -2.36
VCPP55072 SNORA25.12-201ENST00000516202 82 ntBASIC0.33□□□□□ -2.36
VCPP55072 RNU6-111P-201ENST00000517179 105 ntBASIC0.33□□□□□ -2.36
VCPP55072 IGLVI-20-201ENST00000519296 130 ntBASIC0.33□□□□□ -2.36
VCPP55072 MTND5P32-201ENST00000560711 1802 ntBASIC0.33□□□□□ -2.36
VCPP55072 Y_RNA.13-201ENST00000362403 112 ntBASIC0.32□□□□□ -2.36
VCPP55072 RNU6-403P-201ENST00000363163 104 ntBASIC0.32□□□□□ -2.36
VCPP55072 RNU6-949P-201ENST00000384040 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms