Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 RNU6-296P-201ENST00000384608 107 ntBASIC3.19□□□□□ -1.9
HDGFP51858 RNA5SP292-201ENST00000390974 118 ntBASIC3.19□□□□□ -1.9
HDGFP51858 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
HDGFP51858 RNU6-295P-201ENST00000516901 104 ntBASIC3.19□□□□□ -1.9
HDGFP51858 MIR4709-201ENST00000577272 72 ntBASIC3.19□□□□□ -1.9
HDGFP51858 MIR4484-201ENST00000582855 83 ntBASIC3.19□□□□□ -1.9
HDGFP51858 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDGFP51858 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDGFP51858 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HDGFP51858 Y_RNA.340-201ENST00000365330 92 ntBASIC3.18□□□□□ -1.9
HDGFP51858 MIR520A-201ENST00000384862 85 ntBASIC3.18□□□□□ -1.9
HDGFP51858 U8.13-201ENST00000390842 128 ntBASIC3.18□□□□□ -1.9
HDGFP51858 RNU6-850P-201ENST00000516934 103 ntBASIC3.18□□□□□ -1.9
HDGFP51858 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.18□□□□□ -1.9
HDGFP51858 AL512598.1-201ENST00000610158 273 ntBASIC3.18□□□□□ -1.9
HDGFP51858 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.18□□□□□ -1.9
HDGFP51858 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HDGFP51858 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
HDGFP51858 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
HDGFP51858 RNY1P2-201ENST00000364820 117 ntBASIC3.17□□□□□ -1.9
HDGFP51858 RPS27P21-201ENST00000486977 252 ntBASIC3.17□□□□□ -1.9
HDGFP51858 RNU6-448P-201ENST00000517052 107 ntBASIC3.17□□□□□ -1.9
HDGFP51858 SUB1P4-201ENST00000566062 339 ntBASIC3.17□□□□□ -1.9
HDGFP51858 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HDGFP51858 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDGFP51858 RNU6-112P-201ENST00000363599 104 ntBASIC3.16□□□□□ -1.9
HDGFP51858 RNU1-148P-201ENST00000384472 162 ntBASIC3.16□□□□□ -1.9
HDGFP51858 SNORD38B-201ENST00000384690 67 ntBASIC3.16□□□□□ -1.9
HDGFP51858 SNORA40.18-201ENST00000391200 128 ntBASIC3.16□□□□□ -1.9
HDGFP51858 MIR1265-201ENST00000408444 86 ntBASIC3.16□□□□□ -1.9
HDGFP51858 AC125388.1-201ENST00000459631 156 ntBASIC3.16□□□□□ -1.9
HDGFP51858 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
HDGFP51858 RNU7-43P-201ENST00000516554 64 ntBASIC3.16□□□□□ -1.9
HDGFP51858 SNORD38B-202ENST00000625943 69 ntBASIC3.16□□□□□ -1.9
HDGFP51858 MIR664A-201ENST00000626086 82 ntBASIC3.16□□□□□ -1.9
HDGFP51858 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HDGFP51858 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.9
HDGFP51858 MIR520C-201ENST00000385005 87 ntBASIC3.15□□□□□ -1.91
HDGFP51858 SNORA48.3-201ENST00000391081 134 ntBASIC3.15□□□□□ -1.91
HDGFP51858 BX276092.1-201ENST00000427368 251 ntBASIC3.15□□□□□ -1.91
HDGFP51858 SNRPGP12-201ENST00000449481 213 ntBASIC3.15□□□□□ -1.91
HDGFP51858 AC138749.4-201ENST00000563970 127 ntBASIC3.15□□□□□ -1.91
HDGFP51858 AP000753.3-201ENST00000604083 169 ntBASIC3.15□□□□□ -1.91
HDGFP51858 AL161722.3-201ENST00000605789 2983 ntBASIC3.15□□□□□ -1.91
HDGFP51858 MIR21-201ENST00000362134 72 ntBASIC3.14□□□□□ -1.91
HDGFP51858 AL023284.1-201ENST00000403956 276 ntBASIC3.14□□□□□ -1.91
HDGFP51858 RNA5SP237-201ENST00000410414 113 ntBASIC3.14□□□□□ -1.91
HDGFP51858 AC244023.1-201ENST00000426884 112 ntBASIC3.14□□□□□ -1.91
HDGFP51858 snoU13.27-201ENST00000459278 104 ntBASIC3.14□□□□□ -1.91
HDGFP51858 RNU6-70P-201ENST00000516438 60 ntBASIC3.14□□□□□ -1.91
HDGFP51858 RNU6-687P-201ENST00000516443 89 ntBASIC3.14□□□□□ -1.91
HDGFP51858 MIR3126-201ENST00000577443 74 ntBASIC3.14□□□□□ -1.91
HDGFP51858 AC242498.1-201ENST00000604134 111 ntBASIC3.14□□□□□ -1.91
HDGFP51858 AL662814.1-201ENST00000617364 121 ntBASIC3.14□□□□□ -1.91
HDGFP51858 MIR424-201ENST00000362227 98 ntBASIC3.13□□□□□ -1.91
HDGFP51858 MIR635-201ENST00000384830 98 ntBASIC3.13□□□□□ -1.91
HDGFP51858 Y_RNA.648-201ENST00000459455 110 ntBASIC3.13□□□□□ -1.91
HDGFP51858 RNU7-41P-201ENST00000515917 61 ntBASIC3.13□□□□□ -1.91
HDGFP51858 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.13□□□□□ -1.91
HDGFP51858 SNORA18.5-201ENST00000516616 101 ntBASIC3.13□□□□□ -1.91
HDGFP51858 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.13□□□□□ -1.91
HDGFP51858 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HDGFP51858 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
HDGFP51858 RNU6-949P-201ENST00000384040 107 ntBASIC3.12□□□□□ -1.91
HDGFP51858 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.12□□□□□ -1.91
HDGFP51858 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDGFP51858 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
HDGFP51858 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDGFP51858 Y_RNA.386-201ENST00000383913 105 ntBASIC3.11□□□□□ -1.91
HDGFP51858 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
HDGFP51858 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.11□□□□□ -1.91
HDGFP51858 SNORA48.1-201ENST00000390879 135 ntBASIC3.11□□□□□ -1.91
HDGFP51858 RNA5SP501-201ENST00000410990 112 ntBASIC3.11□□□□□ -1.91
HDGFP51858 MIR4536-1-201ENST00000583537 88 ntBASIC3.11□□□□□ -1.91
HDGFP51858 AP000942.3-201ENST00000603702 160 ntBASIC3.11□□□□□ -1.91
HDGFP51858 MIR4251-201ENST00000635819 61 ntBASIC3.11□□□□□ -1.91
HDGFP51858 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HDGFP51858 RNU6-132P-201ENST00000383863 107 ntBASIC3.1□□□□□ -1.91
HDGFP51858 RNA5SP182-201ENST00000516064 82 ntBASIC3.1□□□□□ -1.91
HDGFP51858 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.1□□□□□ -1.91
HDGFP51858 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
HDGFP51858 RNU6-811P-201ENST00000384069 107 ntBASIC3.09□□□□□ -1.91
HDGFP51858 MIR518A2-201ENST00000384966 87 ntBASIC3.09□□□□□ -1.91
HDGFP51858 SNORD90-201ENST00000391145 111 ntBASIC3.09□□□□□ -1.91
HDGFP51858 RNU6-380P-201ENST00000410207 107 ntBASIC3.09□□□□□ -1.91
HDGFP51858 RNU6-871P-201ENST00000516122 100 ntBASIC3.09□□□□□ -1.91
HDGFP51858 SNORD36A-201ENST00000362874 73 ntBASIC3.08□□□□□ -1.92
HDGFP51858 MIR516A2-201ENST00000384888 90 ntBASIC3.08□□□□□ -1.92
HDGFP51858 MIR516A1-201ENST00000385033 90 ntBASIC3.08□□□□□ -1.92
HDGFP51858 MIR520H-201ENST00000385126 88 ntBASIC3.08□□□□□ -1.92
HDGFP51858 RNA5SP247-201ENST00000411181 105 ntBASIC3.08□□□□□ -1.92
HDGFP51858 HSPE1P24-201ENST00000450782 238 ntBASIC3.08□□□□□ -1.92
HDGFP51858 AC009474.2-201ENST00000451383 136 ntBASIC3.08□□□□□ -1.92
HDGFP51858 RNU6-75P-201ENST00000515944 104 ntBASIC3.08□□□□□ -1.92
HDGFP51858 PRELID3BP2-201ENST00000605362 201 ntBASIC3.08□□□□□ -1.92
HDGFP51858 U6.109-201ENST00000636749 87 ntBASIC3.08□□□□□ -1.92
HDGFP51858 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HDGFP51858 Y_RNA.119-201ENST00000363301 96 ntBASIC3.07□□□□□ -1.92
HDGFP51858 Y_RNA.338-201ENST00000365320 114 ntBASIC3.07□□□□□ -1.92
HDGFP51858 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms