Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 AL359821.1-201ENST00000605519 182 ntBASIC1.77□□□□□ -2.13
SOX9P48436 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.77□□□□□ -2.13
SOX9P48436 AC087741.2-201ENST00000619415 172 ntBASIC1.77□□□□□ -2.13
SOX9P48436 AL035470.1-201ENST00000622571 220 ntBASIC1.77□□□□□ -2.13
SOX9P48436 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SOX9P48436 Y_RNA.85-201ENST00000363014 111 ntBASIC1.76□□□□□ -2.13
SOX9P48436 SNORD115-19-201ENST00000363098 82 ntBASIC1.76□□□□□ -2.13
SOX9P48436 SNORD115-18-201ENST00000363293 82 ntBASIC1.76□□□□□ -2.13
SOX9P48436 SNORD115-17-201ENST00000364612 82 ntBASIC1.76□□□□□ -2.13
SOX9P48436 RNU6-44P-201ENST00000384045 107 ntBASIC1.76□□□□□ -2.13
SOX9P48436 Y_RNA.549-201ENST00000384657 102 ntBASIC1.76□□□□□ -2.13
SOX9P48436 RNY4P18-201ENST00000391107 89 ntBASIC1.76□□□□□ -2.13
SOX9P48436 AL591704.2-201ENST00000421658 181 ntBASIC1.76□□□□□ -2.13
SOX9P48436 AC063976.4-201ENST00000421971 163 ntBASIC1.76□□□□□ -2.13
SOX9P48436 RNU7-79P-201ENST00000516082 62 ntBASIC1.76□□□□□ -2.13
SOX9P48436 RNU7-35P-201ENST00000517174 62 ntBASIC1.76□□□□□ -2.13
SOX9P48436 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
SOX9P48436 Y_RNA.81-201ENST00000362997 102 ntBASIC1.75□□□□□ -2.13
SOX9P48436 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
SOX9P48436 RNU6-1107P-201ENST00000364817 104 ntBASIC1.75□□□□□ -2.13
SOX9P48436 SNORA2B-201ENST00000384583 137 ntBASIC1.75□□□□□ -2.13
SOX9P48436 RNU6-910P-201ENST00000390844 107 ntBASIC1.75□□□□□ -2.13
SOX9P48436 MIR1912-201ENST00000410389 80 ntBASIC1.75□□□□□ -2.13
SOX9P48436 RNU7-95P-201ENST00000459222 64 ntBASIC1.75□□□□□ -2.13
SOX9P48436 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
SOX9P48436 AL662814.1-201ENST00000617364 121 ntBASIC1.75□□□□□ -2.13
SOX9P48436 AL162726.3-218ENST00000636401 95 ntBASIC1.75□□□□□ -2.13
SOX9P48436 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
SOX9P48436 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SOX9P48436 RNU6-616P-201ENST00000384353 107 ntBASIC1.74□□□□□ -2.13
SOX9P48436 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
SOX9P48436 MIR489-201ENST00000384923 84 ntBASIC1.74□□□□□ -2.13
SOX9P48436 RNU6-816P-201ENST00000390914 107 ntBASIC1.74□□□□□ -2.13
SOX9P48436 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
SOX9P48436 RNU6-1268P-201ENST00000391214 107 ntBASIC1.74□□□□□ -2.13
SOX9P48436 RNU6-1239P-201ENST00000391310 107 ntBASIC1.74□□□□□ -2.13
SOX9P48436 snoU13.18-201ENST00000459483 104 ntBASIC1.74□□□□□ -2.13
SOX9P48436 AC141846.1-201ENST00000568348 142 ntBASIC1.74□□□□□ -2.13
SOX9P48436 Y_RNA.155-201ENST00000363632 101 ntBASIC1.73□□□□□ -2.13
SOX9P48436 MIR222-201ENST00000384992 110 ntBASIC1.73□□□□□ -2.13
SOX9P48436 RNU6-1165P-201ENST00000410119 107 ntBASIC1.73□□□□□ -2.13
SOX9P48436 RNA5SP95-201ENST00000410319 137 ntBASIC1.73□□□□□ -2.13
SOX9P48436 SNORA70.22-201ENST00000517160 124 ntBASIC1.73□□□□□ -2.13
SOX9P48436 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
SOX9P48436 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
SOX9P48436 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SOX9P48436 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.72□□□□□ -2.13
SOX9P48436 AC068339.1-201ENST00000526965 141 ntBASIC1.72□□□□□ -2.13
SOX9P48436 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
SOX9P48436 MIR6740-201ENST00000618268 113 ntBASIC1.72□□□□□ -2.13
SOX9P48436 Y_RNA.168-201ENST00000363740 102 ntBASIC1.71□□□□□ -2.14
SOX9P48436 SNORA75.2-201ENST00000391138 150 ntBASIC1.71□□□□□ -2.14
SOX9P48436 SNORA75.3-201ENST00000391231 150 ntBASIC1.71□□□□□ -2.14
SOX9P48436 MIR1302-5-201ENST00000408164 150 ntBASIC1.71□□□□□ -2.14
SOX9P48436 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
SOX9P48436 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
SOX9P48436 Y_RNA.773-201ENST00000607168 90 ntBASIC1.71□□□□□ -2.14
SOX9P48436 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SOX9P48436 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
SOX9P48436 RNU4-67P-201ENST00000364569 141 ntBASIC1.7□□□□□ -2.14
SOX9P48436 SNORD113.3-201ENST00000364630 78 ntBASIC1.7□□□□□ -2.14
SOX9P48436 RNU6-409P-201ENST00000384114 104 ntBASIC1.7□□□□□ -2.14
SOX9P48436 MT-TF-201ENST00000387314 71 ntBASIC1.7□□□□□ -2.14
SOX9P48436 RNU7-90P-201ENST00000459216 62 ntBASIC1.7□□□□□ -2.14
SOX9P48436 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
SOX9P48436 MIR5009-201ENST00000578736 100 ntBASIC1.7□□□□□ -2.14
SOX9P48436 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
SOX9P48436 MIR1255B1-201ENST00000636325 63 ntBASIC1.7□□□□□ -2.14
SOX9P48436 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
SOX9P48436 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SOX9P48436 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
SOX9P48436 SNORA63.4-201ENST00000362763 126 ntBASIC1.69□□□□□ -2.14
SOX9P48436 SNORD114-10-201ENST00000363409 72 ntBASIC1.69□□□□□ -2.14
SOX9P48436 U8.6-201ENST00000364939 135 ntBASIC1.69□□□□□ -2.14
SOX9P48436 RNU6-1014P-201ENST00000383940 103 ntBASIC1.69□□□□□ -2.14
SOX9P48436 MTATP6P29-201ENST00000415057 132 ntBASIC1.69□□□□□ -2.14
SOX9P48436 MIR1270-201ENST00000459320 83 ntBASIC1.69□□□□□ -2.14
SOX9P48436 PDCD5P2-201ENST00000507570 312 ntBASIC1.69□□□□□ -2.14
SOX9P48436 RNU7-2P-201ENST00000516096 62 ntBASIC1.69□□□□□ -2.14
SOX9P48436 SNORD67.1-201ENST00000516618 108 ntBASIC1.69□□□□□ -2.14
SOX9P48436 RNU6-363P-201ENST00000362895 105 ntBASIC1.68□□□□□ -2.14
SOX9P48436 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
SOX9P48436 RNY1P13-201ENST00000365030 105 ntBASIC1.68□□□□□ -2.14
SOX9P48436 Y_RNA.323-201ENST00000365157 109 ntBASIC1.68□□□□□ -2.14
SOX9P48436 RNU6-949P-201ENST00000384040 107 ntBASIC1.68□□□□□ -2.14
SOX9P48436 MIR563-201ENST00000385080 79 ntBASIC1.68□□□□□ -2.14
SOX9P48436 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.68□□□□□ -2.14
SOX9P48436 SNORA7.5-201ENST00000410672 110 ntBASIC1.68□□□□□ -2.14
SOX9P48436 RNU6-733P-201ENST00000410759 104 ntBASIC1.68□□□□□ -2.14
SOX9P48436 RNU7-21P-201ENST00000459430 62 ntBASIC1.68□□□□□ -2.14
SOX9P48436 AC012676.2-201ENST00000619258 186 ntBASIC1.68□□□□□ -2.14
SOX9P48436 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
SOX9P48436 Y_RNA.363-201ENST00000365529 113 ntBASIC1.67□□□□□ -2.14
SOX9P48436 SNORD111-201ENST00000408139 94 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-447P-201ENST00000410293 104 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-1118P-201ENST00000410382 104 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-1076P-201ENST00000410397 104 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-355P-201ENST00000410427 104 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-791P-201ENST00000410467 104 ntBASIC1.67□□□□□ -2.14
SOX9P48436 RNU6-705P-201ENST00000410601 104 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms