Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 RNU6-848P-201ENST00000515948 107 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 RNU6-617P-201ENST00000516147 107 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 RNU6-473P-201ENST00000516164 107 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 AC138749.4-201ENST00000563970 127 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 MIR3925-201ENST00000584674 77 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 AC105081.1-201ENST00000617727 106 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 AL365265.1-201ENST00000621045 234 ntBASIC-0.36□□□□□ -2.47
SSR1P43307 MIR101-2-201ENST00000362195 79 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 RNU6-381P-201ENST00000391259 108 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 AL365205.2-201ENST00000594586 68 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 AL359881.1-201ENST00000602916 267 ntBASIC-0.37□□□□□ -2.47
SSR1P43307 RNU4-58P-201ENST00000363192 141 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 RNY1P2-201ENST00000364820 117 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 RNU6-988P-201ENST00000519081 107 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.38□□□□□ -2.47
SSR1P43307 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 RNA5SP127-201ENST00000411051 133 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 SNORD2.1-201ENST00000458762 69 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 RNU7-165P-201ENST00000458864 60 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 AC104692.1-201ENST00000472406 90 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 RNU7-35P-201ENST00000517174 62 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 MIR2909-201ENST00000617113 69 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 AL162376.1-201ENST00000624117 175 ntBASIC-0.39□□□□□ -2.47
SSR1P43307 RNU6-161P-201ENST00000363051 106 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 RNU6-728P-201ENST00000365375 104 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 RNU6-652P-201ENST00000365488 107 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 MIR214-201ENST00000385214 110 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 SNORD67.1-201ENST00000516618 108 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 AP003072.1-201ENST00000531740 145 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 MIR4680-201ENST00000580906 66 ntBASIC-0.4□□□□□ -2.47
SSR1P43307 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 RNU6-978P-201ENST00000364371 103 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 MIR892B-201ENST00000401279 77 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 SNORA79-201ENST00000408376 140 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 SNORD4A-201ENST00000459174 72 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 RNA5SP33-201ENST00000516687 98 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 MIR548AD-201ENST00000584780 82 ntBASIC-0.41□□□□□ -2.48
SSR1P43307 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 SNORD114-12-201ENST00000365400 75 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 RNA5SP144-201ENST00000410846 116 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 AL121914.1-201ENST00000450188 156 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 RNU7-113P-201ENST00000459273 62 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.42□□□□□ -2.48
SSR1P43307 RNY3P16-201ENST00000516338 101 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 RNU7-137P-201ENST00000516788 62 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 AC067863.3-201ENST00000624172 122 ntBASIC-0.42□□□□□ -2.48
SSR1P43307 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 AC113618.1-201ENST00000416747 285 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 AC244505.6-201ENST00000452829 130 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SSR1P43307 MIR6514-201ENST00000622549 70 ntBASIC-0.43□□□□□ -2.48
SSR1P43307 SNORA18.1-201ENST00000363418 128 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 RNU4-70P-201ENST00000384579 139 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 MT-TD-201ENST00000387419 68 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 MIR5706-201ENST00000579841 80 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 MIR548AE2-201ENST00000583456 67 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 AL109933.3-201ENST00000619095 188 ntBASIC-0.44□□□□□ -2.48
SSR1P43307 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.44□□□□□ -2.48
SSR1P43307 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 RNU4-17P-201ENST00000365598 141 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 TRBVB-201ENST00000477100 408 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 SNORD116-25-201ENST00000516517 92 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 RNU2-60P-201ENST00000517290 128 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 MIR4643-201ENST00000577473 78 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 U2.14-201ENST00000615943 113 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.45□□□□□ -2.48
SSR1P43307 RNY1P6-201ENST00000384193 109 ntBASIC-0.46□□□□□ -2.48
SSR1P43307 MIR1270-201ENST00000459320 83 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms