Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.818-201ENST00000618813 71 ntBASIC1.91□□□□□ -2.1
CCNFP41002 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCNFP41002 MIR103A2-201ENST00000362154 78 ntBASIC1.9□□□□□ -2.11
CCNFP41002 RNU6-640P-201ENST00000363693 105 ntBASIC1.9□□□□□ -2.11
CCNFP41002 Y_RNA.448-201ENST00000384185 108 ntBASIC1.9□□□□□ -2.11
CCNFP41002 MIR1302-7-201ENST00000408841 72 ntBASIC1.9□□□□□ -2.11
CCNFP41002 RNA5SP247-201ENST00000411181 105 ntBASIC1.9□□□□□ -2.11
CCNFP41002 AL353813.1-201ENST00000440700 253 ntBASIC1.9□□□□□ -2.11
CCNFP41002 AL133373.1-201ENST00000497098 94 ntBASIC1.9□□□□□ -2.11
CCNFP41002 Y_RNA.659-201ENST00000515994 113 ntBASIC1.9□□□□□ -2.11
CCNFP41002 AC006254.2-201ENST00000603259 279 ntBASIC1.9□□□□□ -2.11
CCNFP41002 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCNFP41002 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNFP41002 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNFP41002 Y_RNA.10-201ENST00000362371 110 ntBASIC1.89□□□□□ -2.11
CCNFP41002 Y_RNA.107-201ENST00000363190 121 ntBASIC1.89□□□□□ -2.11
CCNFP41002 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.89□□□□□ -2.11
CCNFP41002 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
CCNFP41002 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
CCNFP41002 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
CCNFP41002 RNU6-865P-201ENST00000364772 107 ntBASIC1.88□□□□□ -2.11
CCNFP41002 Y_RNA.601-201ENST00000410500 113 ntBASIC1.88□□□□□ -2.11
CCNFP41002 MIR2115-201ENST00000516657 100 ntBASIC1.88□□□□□ -2.11
CCNFP41002 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
CCNFP41002 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
CCNFP41002 AL662814.1-201ENST00000617364 121 ntBASIC1.88□□□□□ -2.11
CCNFP41002 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.88□□□□□ -2.11
CCNFP41002 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCNFP41002 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCNFP41002 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCNFP41002 RNA5SP264-201ENST00000363115 107 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNU6-1131P-201ENST00000364955 107 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNY1P13-201ENST00000365030 105 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNU6-1201P-201ENST00000384227 107 ntBASIC1.87□□□□□ -2.11
CCNFP41002 snoU13.2-201ENST00000459201 104 ntBASIC1.87□□□□□ -2.11
CCNFP41002 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNU7-137P-201ENST00000516788 62 ntBASIC1.87□□□□□ -2.11
CCNFP41002 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.87□□□□□ -2.11
CCNFP41002 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
CCNFP41002 MIR3664-201ENST00000579074 99 ntBASIC1.87□□□□□ -2.11
CCNFP41002 AC096720.1-201ENST00000604441 183 ntBASIC1.87□□□□□ -2.11
CCNFP41002 RNA5SP99-201ENST00000364020 114 ntBASIC1.86□□□□□ -2.11
CCNFP41002 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNU6-1321P-201ENST00000390905 107 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNU6-1307P-201ENST00000391012 103 ntBASIC1.86□□□□□ -2.11
CCNFP41002 MIR1185-1-201ENST00000408598 86 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNA5SP95-201ENST00000410319 137 ntBASIC1.86□□□□□ -2.11
CCNFP41002 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.86□□□□□ -2.11
CCNFP41002 RPS29P28-201ENST00000446439 141 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNU7-62P-201ENST00000458856 62 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNU6-1018P-201ENST00000516577 106 ntBASIC1.86□□□□□ -2.11
CCNFP41002 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.86□□□□□ -2.11
CCNFP41002 AL442128.1-201ENST00000615151 90 ntBASIC1.86□□□□□ -2.11
CCNFP41002 RNU6-1313P-201ENST00000362622 102 ntBASIC1.85□□□□□ -2.11
CCNFP41002 Y_RNA.93-201ENST00000363066 109 ntBASIC1.85□□□□□ -2.11
CCNFP41002 RNU6-654P-201ENST00000364373 107 ntBASIC1.85□□□□□ -2.11
CCNFP41002 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
CCNFP41002 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
CCNFP41002 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.85□□□□□ -2.11
CCNFP41002 MTATP8P2-201ENST00000435212 202 ntBASIC1.85□□□□□ -2.11
CCNFP41002 RN7SKP88-201ENST00000516847 250 ntBASIC1.85□□□□□ -2.11
CCNFP41002 RNU6-902P-201ENST00000517212 91 ntBASIC1.85□□□□□ -2.11
CCNFP41002 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.85□□□□□ -2.11
CCNFP41002 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
CCNFP41002 MIR4264-201ENST00000583520 66 ntBASIC1.85□□□□□ -2.11
CCNFP41002 7SK.8-201ENST00000612110 250 ntBASIC1.85□□□□□ -2.11
CCNFP41002 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
CCNFP41002 AC012531.4-201ENST00000616509 177 ntBASIC1.85□□□□□ -2.11
CCNFP41002 MIR6740-201ENST00000618268 113 ntBASIC1.85□□□□□ -2.11
CCNFP41002 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
CCNFP41002 MIR6516-201ENST00000630554 81 ntBASIC1.85□□□□□ -2.11
CCNFP41002 MIR2052-201ENST00000636055 55 ntBASIC1.85□□□□□ -2.11
CCNFP41002 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCNFP41002 SNORD114-10-201ENST00000363409 72 ntBASIC1.84□□□□□ -2.11
CCNFP41002 MIR34C-201ENST00000384831 77 ntBASIC1.84□□□□□ -2.11
CCNFP41002 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCNFP41002 UBL5P1-201ENST00000507979 193 ntBASIC1.84□□□□□ -2.11
CCNFP41002 RNU6-165P-201ENST00000517170 99 ntBASIC1.84□□□□□ -2.11
CCNFP41002 AC133485.1-201ENST00000567176 124 ntBASIC1.84□□□□□ -2.11
CCNFP41002 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
CCNFP41002 MIR548Z-201ENST00000584743 97 ntBASIC1.84□□□□□ -2.11
CCNFP41002 SNORD45B-201ENST00000364617 72 ntBASIC1.83□□□□□ -2.12
CCNFP41002 Y_RNA.330-201ENST00000365230 109 ntBASIC1.83□□□□□ -2.12
CCNFP41002 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
CCNFP41002 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
CCNFP41002 MIR376B-201ENST00000614515 100 ntBASIC1.83□□□□□ -2.12
CCNFP41002 AC091304.10-201ENST00000641554 121 ntBASIC1.83□□□□□ -2.12
CCNFP41002 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
CCNFP41002 RNU6-170P-201ENST00000362832 104 ntBASIC1.82□□□□□ -2.12
CCNFP41002 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
CCNFP41002 MIR488-201ENST00000365739 83 ntBASIC1.82□□□□□ -2.12
CCNFP41002 RNU6-1165P-201ENST00000410119 107 ntBASIC1.82□□□□□ -2.12
CCNFP41002 RNU7-48P-201ENST00000458875 63 ntBASIC1.82□□□□□ -2.12
CCNFP41002 RNU7-61P-201ENST00000515897 61 ntBASIC1.82□□□□□ -2.12
CCNFP41002 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
CCNFP41002 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.82□□□□□ -2.12
CCNFP41002 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCNFP41002 Y_RNA.247-201ENST00000364500 92 ntBASIC1.81□□□□□ -2.12
CCNFP41002 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms