Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNA5SP368-201ENST00000364298 116 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 RNU6-597P-201ENST00000365620 102 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 Y_RNA.512-201ENST00000384518 102 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 MIR606-201ENST00000384851 96 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AC015818.7-201ENST00000428754 109 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 MTCYBP6-201ENST00000441810 138 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AC087499.7-201ENST00000441958 109 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AL138752.1-201ENST00000452964 351 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AC104692.1-201ENST00000472406 90 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 RNU6-1194P-201ENST00000516208 104 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 SNORA25.18-201ENST00000607153 114 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AC078938.1-201ENST00000620993 318 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 AL162376.1-201ENST00000624117 175 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 Y_RNA.11-201ENST00000362375 109 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 Y_RNA.422-201ENST00000384054 114 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 Y_RNA.622-201ENST00000411091 108 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 RNY3P16-201ENST00000516338 101 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 SNORD116-25-201ENST00000516517 92 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 RNU6-135P-201ENST00000516769 101 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 RNU7-35P-201ENST00000517174 62 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 AC008737.2-201ENST00000599446 118 ntBASIC0.11□□□□□ -2.39
SCN4AP35499 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNY4P3-201ENST00000365254 95 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 SNORA20-201ENST00000384662 132 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 Y_RNA.604-201ENST00000410574 102 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU4-43P-201ENST00000410628 137 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU7-53P-201ENST00000516705 60 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 SNORD36C-201ENST00000516733 66 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 AC138869.1-201ENST00000568623 124 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 AC006504.6-201ENST00000590142 199 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 AC244669.1-204ENST00000621564 178 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 MTND5P32-201ENST00000560711 1802 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 Y_RNA.65-201ENST00000362846 100 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 Y_RNA.133-201ENST00000363428 110 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 Y_RNA.145-201ENST00000363527 102 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 Y_RNA.277-201ENST00000364754 102 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 SNORA8.2-201ENST00000384372 139 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 U8.15-201ENST00000390947 134 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU6-578P-201ENST00000390980 103 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU7-79P-201ENST00000516082 62 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
SCN4AP35499 RNU6-818P-201ENST00000364837 108 ntBASIC0.09□□□□□ -2.39
SCN4AP35499 Y_RNA.483-201ENST00000384380 101 ntBASIC0.09□□□□□ -2.39
SCN4AP35499 Y_RNA.515-201ENST00000384535 112 ntBASIC0.09□□□□□ -2.39
SCN4AP35499 Y_RNA.697-201ENST00000516776 113 ntBASIC0.09□□□□□ -2.39
SCN4AP35499 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.39
SCN4AP35499 MIR367-201ENST00000362299 68 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 snoU2_19.4-201ENST00000364329 80 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-726P-201ENST00000364680 107 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNA5SP517-201ENST00000364724 117 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-381P-201ENST00000391259 108 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 AF228730.3-201ENST00000436691 102 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 SNORA36.1-201ENST00000363424 132 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNY1P6-201ENST00000384193 109 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-1289P-201ENST00000384431 106 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-1321P-201ENST00000390905 107 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 BX276092.1-201ENST00000427368 251 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 SNORD127-201ENST00000458892 86 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-1258P-201ENST00000516911 111 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 AC011603.4-201ENST00000611325 277 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 MIR6082-201ENST00000613604 109 ntBASIC0.08□□□□□ -2.4
SCN4AP35499 RNU6-509P-201ENST00000363519 107 ntBASIC0.07□□□□□ -2.4
SCN4AP35499 Y_RNA.185-201ENST00000363894 100 ntBASIC0.07□□□□□ -2.4
SCN4AP35499 Y_RNA.326-201ENST00000365176 113 ntBASIC0.07□□□□□ -2.4
SCN4AP35499 RNU6-429P-201ENST00000384582 108 ntBASIC0.07□□□□□ -2.4
SCN4AP35499 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
SCN4AP35499 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
SCN4AP35499 Y_RNA.76-201ENST00000362931 109 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 Y_RNA.362-201ENST00000365518 110 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 Y_RNA.454-201ENST00000384224 113 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 Y_RNA.567-201ENST00000384736 106 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR588-201ENST00000384900 83 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIRLET7F2-201ENST00000385277 83 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 SEPT7P4-201ENST00000437076 306 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 RNU7-113P-201ENST00000459273 62 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 RNA5SP33-201ENST00000516687 98 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
SCN4AP35499 Y_RNA.54-201ENST00000362766 105 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 RNU6-1292P-201ENST00000383856 107 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 Y_RNA.542-201ENST00000384641 111 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 SNORD28-201ENST00000384706 75 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR635-201ENST00000384830 98 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 AC133485.4-201ENST00000561835 220 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR378D2-201ENST00000580636 98 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR4639-201ENST00000584938 69 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR8062-201ENST00000621515 85 ntBASIC0.06□□□□□ -2.4
SCN4AP35499 MIR101-2-201ENST00000362195 79 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 RNU6-1082P-201ENST00000364574 107 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 SNORA18-201ENST00000384416 132 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 MIR644A-201ENST00000385262 94 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 SCARNA15-202ENST00000516881 127 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms